Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Gm16198-201ENSMUST00000118766 670 ntBASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Gm27300-201ENSMUST00000184085 97 ntBASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Gm27335-201ENSMUST00000184758 97 ntBASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Mir7071-201ENSMUST00000184847 69 ntBASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Gm8337-201ENSMUST00000187358 1938 ntBASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Gm13410-201ENSMUST00000117058 1415 ntBASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
RTRAFQ9CQE8 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.67
RTRAFQ9CQE8 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.67
RTRAFQ9CQE8 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RTRAFQ9CQE8 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
RTRAFQ9CQE8 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RTRAFQ9CQE8 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RTRAFQ9CQE8 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RTRAFQ9CQE8 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
RTRAFQ9CQE8 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.83□□□□□ -0.68
RTRAFQ9CQE8 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.83□□□□□ -0.68
RTRAFQ9CQE8 Gm45751-201ENSMUST00000210185 1573 ntBASIC10.83□□□□□ -0.68
RTRAFQ9CQE8 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RTRAFQ9CQE8 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RTRAFQ9CQE8 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
RTRAFQ9CQE8 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC10.83□□□□□ -0.68
RTRAFQ9CQE8 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RTRAFQ9CQE8 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RTRAFQ9CQE8 Klk2-ps-201ENSMUST00000205342 571 ntBASIC10.83□□□□□ -0.68
RTRAFQ9CQE8 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RTRAFQ9CQE8 AC149294.4-201ENSMUST00000227870 882 ntBASIC10.83□□□□□ -0.68
RTRAFQ9CQE8 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RTRAFQ9CQE8 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RTRAFQ9CQE8 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.83□□□□□ -0.68
RTRAFQ9CQE8 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RTRAFQ9CQE8 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RTRAFQ9CQE8 Gm6756-201ENSMUST00000180647 1620 ntBASIC10.83□□□□□ -0.68
RTRAFQ9CQE8 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RTRAFQ9CQE8 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RTRAFQ9CQE8 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RTRAFQ9CQE8 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.83□□□□□ -0.68
RTRAFQ9CQE8 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RTRAFQ9CQE8 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
RTRAFQ9CQE8 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Gm13036-201ENSMUST00000117799 748 ntBASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms