Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chchd1Q9CQA6 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Chchd1Q9CQA6 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chchd1Q9CQA6 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.02□□□□□ -0.81
Chchd1Q9CQA6 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chchd1Q9CQA6 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.02□□□□□ -0.81
Chchd1Q9CQA6 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chchd1Q9CQA6 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chchd1Q9CQA6 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chchd1Q9CQA6 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chchd1Q9CQA6 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chchd1Q9CQA6 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chchd1Q9CQA6 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chchd1Q9CQA6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chchd1Q9CQA6 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chchd1Q9CQA6 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Chchd1Q9CQA6 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chchd1Q9CQA6 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.02□□□□□ -0.81
Chchd1Q9CQA6 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Gm29741-201ENSMUST00000192667 421 ntBASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.01□□□□□ -0.81
Chchd1Q9CQA6 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Chchd1Q9CQA6 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Chchd1Q9CQA6 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10□□□□□ -0.81
Chchd1Q9CQA6 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Gm43174-201ENSMUST00000195914 2445 ntBASIC10□□□□□ -0.81
Chchd1Q9CQA6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Chchd1Q9CQA6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Gm27867-201ENSMUST00000184778 125 ntBASIC10□□□□□ -0.81
Chchd1Q9CQA6 Gm37153-201ENSMUST00000193637 231 ntBASIC10□□□□□ -0.81
Chchd1Q9CQA6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Chchd1Q9CQA6 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms