Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ska1Q9CPV1 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ska1Q9CPV1 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ska1Q9CPV1 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Ska1Q9CPV1 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Ska1Q9CPV1 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Ska1Q9CPV1 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.39
Ska1Q9CPV1 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Gm27622-201ENSMUST00000183779 60 ntBASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Gm6916-202ENSMUST00000205523 195 ntBASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ska1Q9CPV1 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ska1Q9CPV1 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ska1Q9CPV1 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.62□□□□□ -0.39
Ska1Q9CPV1 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ska1Q9CPV1 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ska1Q9CPV1 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ska1Q9CPV1 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ska1Q9CPV1 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ska1Q9CPV1 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ska1Q9CPV1 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ska1Q9CPV1 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.62□□□□□ -0.39
Ska1Q9CPV1 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms