Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Gm13408-201ENSMUST00000119822 798 ntBASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Gm13935-201ENSMUST00000121859 798 ntBASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Gm10179-201ENSMUST00000086233 688 ntBASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Col25a1Q99MQ5 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col25a1Q99MQ5 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col25a1Q99MQ5 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col25a1Q99MQ5 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.79□□□□□ -0.2
Col25a1Q99MQ5 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col25a1Q99MQ5 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col25a1Q99MQ5 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col25a1Q99MQ5 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col25a1Q99MQ5 Gm13665-201ENSMUST00000120830 528 ntBASIC13.79□□□□□ -0.2
Col25a1Q99MQ5 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.79□□□□□ -0.2
Col25a1Q99MQ5 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.79□□□□□ -0.2
Col25a1Q99MQ5 Gm7666-201ENSMUST00000146631 819 ntBASIC13.79□□□□□ -0.2
Col25a1Q99MQ5 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col25a1Q99MQ5 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Col25a1Q99MQ5 Gm20392-201ENSMUST00000173047 701 ntBASIC13.79□□□□□ -0.2
Col25a1Q99MQ5 Gm3890-201ENSMUST00000182416 207 ntBASIC13.79□□□□□ -0.2
Col25a1Q99MQ5 Gm19166-201ENSMUST00000196041 1063 ntBASIC13.79□□□□□ -0.2
Col25a1Q99MQ5 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC13.79□□□□□ -0.2
Col25a1Q99MQ5 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col25a1Q99MQ5 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col25a1Q99MQ5 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.79□□□□□ -0.2
Col25a1Q99MQ5 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col25a1Q99MQ5 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col25a1Q99MQ5 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.79□□□□□ -0.2
Col25a1Q99MQ5 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col25a1Q99MQ5 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Col25a1Q99MQ5 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col25a1Q99MQ5 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col25a1Q99MQ5 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.79□□□□□ -0.2
Col25a1Q99MQ5 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col25a1Q99MQ5 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col25a1Q99MQ5 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col25a1Q99MQ5 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Col25a1Q99MQ5 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col25a1Q99MQ5 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col25a1Q99MQ5 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col25a1Q99MQ5 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col25a1Q99MQ5 Gm9062-201ENSMUST00000117712 727 ntBASIC13.78□□□□□ -0.2
Col25a1Q99MQ5 Gm15957-201ENSMUST00000118893 974 ntBASIC13.78□□□□□ -0.2
Col25a1Q99MQ5 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col25a1Q99MQ5 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC13.78□□□□□ -0.2
Col25a1Q99MQ5 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col25a1Q99MQ5 Gm24420-201ENSMUST00000176676 59 ntBASIC13.78□□□□□ -0.2
Col25a1Q99MQ5 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col25a1Q99MQ5 Gm26956-201ENSMUST00000182176 986 ntBASIC13.78□□□□□ -0.2
Col25a1Q99MQ5 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.78□□□□□ -0.2
Col25a1Q99MQ5 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.78□□□□□ -0.2
Col25a1Q99MQ5 Gm44262-201ENSMUST00000204969 372 ntBASIC13.78□□□□□ -0.2
Col25a1Q99MQ5 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.78□□□□□ -0.2
Col25a1Q99MQ5 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
Col25a1Q99MQ5 AC159376.1-201ENSMUST00000218504 630 ntBASIC13.78□□□□□ -0.2
Col25a1Q99MQ5 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.78□□□□□ -0.2
Col25a1Q99MQ5 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col25a1Q99MQ5 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms