Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clp1Q99LI9 Gm19087-201ENSMUST00000191430 946 ntBASIC14.02□□□□□ -0.17
Clp1Q99LI9 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.02□□□□□ -0.17
Clp1Q99LI9 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clp1Q99LI9 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clp1Q99LI9 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clp1Q99LI9 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clp1Q99LI9 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clp1Q99LI9 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.02□□□□□ -0.17
Clp1Q99LI9 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clp1Q99LI9 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clp1Q99LI9 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Clp1Q99LI9 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Clp1Q99LI9 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clp1Q99LI9 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.02□□□□□ -0.17
Clp1Q99LI9 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clp1Q99LI9 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clp1Q99LI9 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clp1Q99LI9 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clp1Q99LI9 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clp1Q99LI9 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clp1Q99LI9 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Clp1Q99LI9 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Clp1Q99LI9 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.01□□□□□ -0.17
Clp1Q99LI9 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Clp1Q99LI9 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clp1Q99LI9 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clp1Q99LI9 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clp1Q99LI9 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clp1Q99LI9 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.01□□□□□ -0.17
Clp1Q99LI9 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clp1Q99LI9 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clp1Q99LI9 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clp1Q99LI9 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.01□□□□□ -0.17
Clp1Q99LI9 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clp1Q99LI9 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clp1Q99LI9 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.01□□□□□ -0.17
Clp1Q99LI9 Gm38317-201ENSMUST00000195564 343 ntBASIC14.01□□□□□ -0.17
Clp1Q99LI9 Gm44882-201ENSMUST00000205702 802 ntBASIC14.01□□□□□ -0.17
Clp1Q99LI9 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.01□□□□□ -0.17
Clp1Q99LI9 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clp1Q99LI9 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clp1Q99LI9 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clp1Q99LI9 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clp1Q99LI9 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clp1Q99LI9 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Clp1Q99LI9 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Clp1Q99LI9 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clp1Q99LI9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clp1Q99LI9 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clp1Q99LI9 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clp1Q99LI9 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clp1Q99LI9 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clp1Q99LI9 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clp1Q99LI9 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clp1Q99LI9 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clp1Q99LI9 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clp1Q99LI9 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clp1Q99LI9 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14□□□□□ -0.17
Clp1Q99LI9 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Clp1Q99LI9 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clp1Q99LI9 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clp1Q99LI9 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clp1Q99LI9 Gm43205-201ENSMUST00000198622 1968 ntBASIC14□□□□□ -0.17
Clp1Q99LI9 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Clp1Q99LI9 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clp1Q99LI9 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clp1Q99LI9 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clp1Q99LI9 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Clp1Q99LI9 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clp1Q99LI9 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Clp1Q99LI9 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Clp1Q99LI9 Gm4909-201ENSMUST00000118749 794 ntBASIC14□□□□□ -0.17
Clp1Q99LI9 Gm12502-201ENSMUST00000120197 444 ntBASIC14□□□□□ -0.17
Clp1Q99LI9 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC14□□□□□ -0.17
Clp1Q99LI9 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14□□□□□ -0.17
Clp1Q99LI9 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clp1Q99LI9 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clp1Q99LI9 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Clp1Q99LI9 Gm2260-201ENSMUST00000184965 657 ntBASIC14□□□□□ -0.17
Clp1Q99LI9 Gm36991-201ENSMUST00000191800 648 ntBASIC14□□□□□ -0.17
Clp1Q99LI9 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Clp1Q99LI9 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clp1Q99LI9 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14□□□□□ -0.17
Clp1Q99LI9 Gm6458-201ENSMUST00000211573 635 ntBASIC14□□□□□ -0.17
Clp1Q99LI9 Gm18212-201ENSMUST00000211678 889 ntBASIC14□□□□□ -0.17
Clp1Q99LI9 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14□□□□□ -0.17
Clp1Q99LI9 Gm18615-201ENSMUST00000222919 1031 ntBASIC14□□□□□ -0.17
Clp1Q99LI9 AC126253.1-202ENSMUST00000226732 835 ntBASIC14□□□□□ -0.17
Clp1Q99LI9 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clp1Q99LI9 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clp1Q99LI9 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Clp1Q99LI9 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Clp1Q99LI9 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Clp1Q99LI9 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clp1Q99LI9 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clp1Q99LI9 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Clp1Q99LI9 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clp1Q99LI9 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Clp1Q99LI9 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms