Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf1Q99LC2 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cstf1Q99LC2 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.34□□□□□ -0.27
Cstf1Q99LC2 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.34□□□□□ -0.27
Cstf1Q99LC2 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cstf1Q99LC2 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cstf1Q99LC2 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cstf1Q99LC2 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cstf1Q99LC2 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cstf1Q99LC2 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
Cstf1Q99LC2 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Cstf1Q99LC2 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cstf1Q99LC2 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cstf1Q99LC2 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Cstf1Q99LC2 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cstf1Q99LC2 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cstf1Q99LC2 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cstf1Q99LC2 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cstf1Q99LC2 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cstf1Q99LC2 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.33□□□□□ -0.28
Cstf1Q99LC2 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cstf1Q99LC2 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cstf1Q99LC2 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cstf1Q99LC2 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cstf1Q99LC2 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cstf1Q99LC2 Gm21769-201ENSMUST00000211922 111 ntBASIC13.33□□□□□ -0.28
Cstf1Q99LC2 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.33□□□□□ -0.28
Cstf1Q99LC2 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Cstf1Q99LC2 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cstf1Q99LC2 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cstf1Q99LC2 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cstf1Q99LC2 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cstf1Q99LC2 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cstf1Q99LC2 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cstf1Q99LC2 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
Cstf1Q99LC2 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cstf1Q99LC2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
Cstf1Q99LC2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cstf1Q99LC2 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cstf1Q99LC2 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cstf1Q99LC2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cstf1Q99LC2 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cstf1Q99LC2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cstf1Q99LC2 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.33□□□□□ -0.28
Cstf1Q99LC2 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cstf1Q99LC2 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cstf1Q99LC2 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cstf1Q99LC2 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms