Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Gm13223-201ENSMUST00000118609 747 ntBASIC12.19□□□□□ -0.46
Lims1Q99JW4 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.19□□□□□ -0.46
Lims1Q99JW4 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.19□□□□□ -0.46
Lims1Q99JW4 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
Lims1Q99JW4 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.19□□□□□ -0.46
Lims1Q99JW4 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lims1Q99JW4 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lims1Q99JW4 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.19□□□□□ -0.46
Lims1Q99JW4 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.19□□□□□ -0.46
Lims1Q99JW4 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Lims1Q99JW4 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.19□□□□□ -0.46
Lims1Q99JW4 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lims1Q99JW4 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Lims1Q99JW4 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.18□□□□□ -0.46
Lims1Q99JW4 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Lims1Q99JW4 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.18□□□□□ -0.46
Lims1Q99JW4 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lims1Q99JW4 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Lims1Q99JW4 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Lims1Q99JW4 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lims1Q99JW4 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lims1Q99JW4 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lims1Q99JW4 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Lims1Q99JW4 Gm13453-201ENSMUST00000118708 357 ntBASIC12.18□□□□□ -0.46
Lims1Q99JW4 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.18□□□□□ -0.46
Lims1Q99JW4 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Lims1Q99JW4 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.18□□□□□ -0.46
Lims1Q99JW4 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lims1Q99JW4 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.18□□□□□ -0.46
Lims1Q99JW4 Gm9063-201ENSMUST00000223299 582 ntBASIC12.18□□□□□ -0.46
Lims1Q99JW4 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.18□□□□□ -0.46
Lims1Q99JW4 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.18□□□□□ -0.46
Lims1Q99JW4 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lims1Q99JW4 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lims1Q99JW4 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lims1Q99JW4 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lims1Q99JW4 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lims1Q99JW4 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Lims1Q99JW4 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lims1Q99JW4 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.18□□□□□ -0.46
Lims1Q99JW4 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lims1Q99JW4 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lims1Q99JW4 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lims1Q99JW4 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lims1Q99JW4 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lims1Q99JW4 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lims1Q99JW4 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.18□□□□□ -0.46
Lims1Q99JW4 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lims1Q99JW4 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lims1Q99JW4 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.18□□□□□ -0.46
Lims1Q99JW4 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Lims1Q99JW4 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lims1Q99JW4 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.17□□□□□ -0.46
Lims1Q99JW4 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.17□□□□□ -0.46
Lims1Q99JW4 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.17□□□□□ -0.46
Lims1Q99JW4 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.17□□□□□ -0.46
Lims1Q99JW4 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lims1Q99JW4 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.17□□□□□ -0.46
Lims1Q99JW4 Gm20949-201ENSMUST00000206478 952 ntBASIC12.17□□□□□ -0.46
Lims1Q99JW4 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms