Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd2Q99JR8 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.43□□□□□ -0.26
Smarcd2Q99JR8 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd2Q99JR8 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd2Q99JR8 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.43□□□□□ -0.26
Smarcd2Q99JR8 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Smarcd2Q99JR8 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd2Q99JR8 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd2Q99JR8 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd2Q99JR8 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd2Q99JR8 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd2Q99JR8 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.43□□□□□ -0.26
Smarcd2Q99JR8 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd2Q99JR8 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd2Q99JR8 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd2Q99JR8 Gm11222-201ENSMUST00000119005 738 ntBASIC13.43□□□□□ -0.26
Smarcd2Q99JR8 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.43□□□□□ -0.26
Smarcd2Q99JR8 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Smarcd2Q99JR8 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Smarcd2Q99JR8 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd2Q99JR8 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd2Q99JR8 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd2Q99JR8 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.43□□□□□ -0.26
Smarcd2Q99JR8 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd2Q99JR8 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
Smarcd2Q99JR8 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd2Q99JR8 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Smarcd2Q99JR8 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd2Q99JR8 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Gm10434-201ENSMUST00000101158 471 ntBASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd2Q99JR8 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd2Q99JR8 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.41□□□□□ -0.26
Smarcd2Q99JR8 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd2Q99JR8 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Smarcd2Q99JR8 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.41□□□□□ -0.26
Smarcd2Q99JR8 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd2Q99JR8 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd2Q99JR8 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd2Q99JR8 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd2Q99JR8 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd2Q99JR8 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd2Q99JR8 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.41□□□□□ -0.26
Smarcd2Q99JR8 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd2Q99JR8 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Smarcd2Q99JR8 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.41□□□□□ -0.26
Smarcd2Q99JR8 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd2Q99JR8 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd2Q99JR8 Gm8738-201ENSMUST00000172606 329 ntBASIC13.41□□□□□ -0.26
Smarcd2Q99JR8 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms