Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc4Q99J62 Gm6447-201ENSMUST00000118905 835 ntBASIC15.34■□□□□ 0.05
Rfc4Q99J62 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.34■□□□□ 0.05
Rfc4Q99J62 Gm11637-201ENSMUST00000120601 592 ntBASIC15.34■□□□□ 0.05
Rfc4Q99J62 Gm16479-201ENSMUST00000121706 932 ntBASIC15.34■□□□□ 0.05
Rfc4Q99J62 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc4Q99J62 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc4Q99J62 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC15.34■□□□□ 0.05
Rfc4Q99J62 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Rfc4Q99J62 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC15.34■□□□□ 0.05
Rfc4Q99J62 Gm21769-201ENSMUST00000211922 111 ntBASIC15.34■□□□□ 0.05
Rfc4Q99J62 Gm19163-201ENSMUST00000223313 780 ntBASIC15.34■□□□□ 0.05
Rfc4Q99J62 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Rfc4Q99J62 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rfc4Q99J62 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc4Q99J62 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC15.34■□□□□ 0.05
Rfc4Q99J62 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc4Q99J62 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc4Q99J62 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc4Q99J62 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Rfc4Q99J62 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc4Q99J62 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc4Q99J62 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.34■□□□□ 0.05
Rfc4Q99J62 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc4Q99J62 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc4Q99J62 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc4Q99J62 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc4Q99J62 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Rfc4Q99J62 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rfc4Q99J62 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.05
Rfc4Q99J62 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC15.33■□□□□ 0.05
Rfc4Q99J62 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Rfc4Q99J62 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rfc4Q99J62 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Rfc4Q99J62 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Rfc4Q99J62 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfc4Q99J62 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfc4Q99J62 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC15.33■□□□□ 0.04
Rfc4Q99J62 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC15.33■□□□□ 0.04
Rfc4Q99J62 Gm26185-201ENSMUST00000157692 266 ntBASIC15.33■□□□□ 0.04
Rfc4Q99J62 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfc4Q99J62 Gm18753-201ENSMUST00000201000 566 ntBASIC15.33■□□□□ 0.04
Rfc4Q99J62 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfc4Q99J62 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfc4Q99J62 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfc4Q99J62 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rfc4Q99J62 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfc4Q99J62 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rfc4Q99J62 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfc4Q99J62 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfc4Q99J62 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfc4Q99J62 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Rfc4Q99J62 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfc4Q99J62 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfc4Q99J62 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.33■□□□□ 0.04
Rfc4Q99J62 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rfc4Q99J62 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfc4Q99J62 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rfc4Q99J62 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfc4Q99J62 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfc4Q99J62 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfc4Q99J62 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfc4Q99J62 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfc4Q99J62 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfc4Q99J62 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Rfc4Q99J62 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfc4Q99J62 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfc4Q99J62 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfc4Q99J62 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC15.32■□□□□ 0.04
Rfc4Q99J62 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rfc4Q99J62 Gm3890-201ENSMUST00000182416 207 ntBASIC15.32■□□□□ 0.04
Rfc4Q99J62 Gm43068-201ENSMUST00000201095 1273 ntBASIC15.32■□□□□ 0.04
Rfc4Q99J62 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfc4Q99J62 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC15.32■□□□□ 0.04
Rfc4Q99J62 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rfc4Q99J62 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Rfc4Q99J62 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Rfc4Q99J62 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rfc4Q99J62 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfc4Q99J62 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfc4Q99J62 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rfc4Q99J62 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfc4Q99J62 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rfc4Q99J62 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rfc4Q99J62 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rfc4Q99J62 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfc4Q99J62 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfc4Q99J62 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfc4Q99J62 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfc4Q99J62 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC15.31■□□□□ 0.04
Rfc4Q99J62 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfc4Q99J62 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfc4Q99J62 Gm2383-201ENSMUST00000181461 807 ntBASIC15.31■□□□□ 0.04
Rfc4Q99J62 Gm4819-201ENSMUST00000182170 1009 ntBASIC15.31■□□□□ 0.04
Rfc4Q99J62 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rfc4Q99J62 Gm4768-201ENSMUST00000206199 686 ntBASIC15.31■□□□□ 0.04
Rfc4Q99J62 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC15.31■□□□□ 0.04
Rfc4Q99J62 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfc4Q99J62 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfc4Q99J62 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms