Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Mir7654-201ENSMUST00000185082 70 ntBASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Gm18624-201ENSMUST00000220966 658 ntBASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Gm26315-201ENSMUST00000083890 321 ntBASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb1Q91Y08 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb1Q91Y08 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Gm5866-201ENSMUST00000177881 973 ntBASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms