Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
Pcdhb2Q91Y00 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.19□□□□□ -0.14
Pcdhb2Q91Y00 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb2Q91Y00 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb2Q91Y00 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Pcdhb2Q91Y00 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb2Q91Y00 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Gm27839-201ENSMUST00000184242 106 ntBASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Gm43433-201ENSMUST00000196573 481 ntBASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhb2Q91Y00 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Gm13612-201ENSMUST00000119276 390 ntBASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb2Q91Y00 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms