Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 Gm649-201ENSMUST00000117284 1054 ntBASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 Gm15483-201ENSMUST00000120338 456 ntBASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 Gm14057-201ENSMUST00000120631 482 ntBASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb3Q91XZ7 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhb3Q91XZ7 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhb3Q91XZ7 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhb3Q91XZ7 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhb3Q91XZ7 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhb3Q91XZ7 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.46□□□□□ -0.26
Pcdhb3Q91XZ7 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhb3Q91XZ7 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhb3Q91XZ7 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
Pcdhb3Q91XZ7 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhb3Q91XZ7 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhb3Q91XZ7 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhb3Q91XZ7 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhb3Q91XZ7 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Pcdhb3Q91XZ7 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhb3Q91XZ7 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhb3Q91XZ7 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Pcdhb3Q91XZ7 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Gm5479-201ENSMUST00000160578 435 ntBASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Gm7063-201ENSMUST00000186840 981 ntBASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms