Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb6Q91XZ4 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb6Q91XZ4 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb6Q91XZ4 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.72□□□□□ -0.21
Pcdhb6Q91XZ4 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb6Q91XZ4 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb6Q91XZ4 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Pcdhb6Q91XZ4 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb6Q91XZ4 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb6Q91XZ4 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb6Q91XZ4 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb6Q91XZ4 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Pcdhb6Q91XZ4 Gm6447-201ENSMUST00000118905 835 ntBASIC13.72□□□□□ -0.21
Pcdhb6Q91XZ4 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.72□□□□□ -0.21
Pcdhb6Q91XZ4 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.72□□□□□ -0.21
Pcdhb6Q91XZ4 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb6Q91XZ4 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Pcdhb6Q91XZ4 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb6Q91XZ4 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb6Q91XZ4 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb6Q91XZ4 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.72□□□□□ -0.21
Pcdhb6Q91XZ4 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb6Q91XZ4 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.72□□□□□ -0.21
Pcdhb6Q91XZ4 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pcdhb6Q91XZ4 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb6Q91XZ4 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb6Q91XZ4 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb6Q91XZ4 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb6Q91XZ4 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb6Q91XZ4 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb6Q91XZ4 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb6Q91XZ4 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb6Q91XZ4 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb6Q91XZ4 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb6Q91XZ4 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb6Q91XZ4 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb6Q91XZ4 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb6Q91XZ4 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb6Q91XZ4 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb6Q91XZ4 Gm5687-201ENSMUST00000118252 640 ntBASIC13.71□□□□□ -0.21
Pcdhb6Q91XZ4 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.71□□□□□ -0.21
Pcdhb6Q91XZ4 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.71□□□□□ -0.21
Pcdhb6Q91XZ4 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.71□□□□□ -0.21
Pcdhb6Q91XZ4 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.71□□□□□ -0.21
Pcdhb6Q91XZ4 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb6Q91XZ4 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb6Q91XZ4 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.71□□□□□ -0.21
Pcdhb6Q91XZ4 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb6Q91XZ4 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Pcdhb6Q91XZ4 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.71□□□□□ -0.21
Pcdhb6Q91XZ4 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb6Q91XZ4 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb6Q91XZ4 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb6Q91XZ4 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Pcdhb6Q91XZ4 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Pcdhb6Q91XZ4 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb6Q91XZ4 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Pcdhb6Q91XZ4 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb6Q91XZ4 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb6Q91XZ4 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb6Q91XZ4 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb6Q91XZ4 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Pcdhb6Q91XZ4 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb6Q91XZ4 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb6Q91XZ4 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb6Q91XZ4 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb6Q91XZ4 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhb6Q91XZ4 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.7□□□□□ -0.22
Pcdhb6Q91XZ4 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb6Q91XZ4 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb6Q91XZ4 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhb6Q91XZ4 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb6Q91XZ4 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhb6Q91XZ4 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.7□□□□□ -0.22
Pcdhb6Q91XZ4 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb6Q91XZ4 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb6Q91XZ4 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb6Q91XZ4 Gm15429-201ENSMUST00000151268 798 ntBASIC13.7□□□□□ -0.22
Pcdhb6Q91XZ4 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb6Q91XZ4 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb6Q91XZ4 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.7□□□□□ -0.22
Pcdhb6Q91XZ4 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.7□□□□□ -0.22
Pcdhb6Q91XZ4 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb6Q91XZ4 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb6Q91XZ4 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhb6Q91XZ4 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb6Q91XZ4 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms