Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Tram1Q91V04 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.48□□□□□ -0.57
Tram1Q91V04 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.48□□□□□ -0.57
Tram1Q91V04 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.48□□□□□ -0.57
Tram1Q91V04 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tram1Q91V04 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Tram1Q91V04 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.48□□□□□ -0.57
Tram1Q91V04 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tram1Q91V04 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tram1Q91V04 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tram1Q91V04 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.47□□□□□ -0.57
Tram1Q91V04 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tram1Q91V04 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tram1Q91V04 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.47□□□□□ -0.57
Tram1Q91V04 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tram1Q91V04 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tram1Q91V04 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tram1Q91V04 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tram1Q91V04 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tram1Q91V04 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tram1Q91V04 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.47□□□□□ -0.57
Tram1Q91V04 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tram1Q91V04 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Tram1Q91V04 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC11.47□□□□□ -0.57
Tram1Q91V04 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.47□□□□□ -0.57
Tram1Q91V04 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC11.47□□□□□ -0.57
Tram1Q91V04 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tram1Q91V04 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tram1Q91V04 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tram1Q91V04 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tram1Q91V04 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Tram1Q91V04 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tram1Q91V04 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tram1Q91V04 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Tram1Q91V04 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tram1Q91V04 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tram1Q91V04 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Tram1Q91V04 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tram1Q91V04 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.47□□□□□ -0.57
Tram1Q91V04 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tram1Q91V04 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tram1Q91V04 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tram1Q91V04 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tram1Q91V04 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.47□□□□□ -0.57
Tram1Q91V04 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tram1Q91V04 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tram1Q91V04 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tram1Q91V04 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tram1Q91V04 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tram1Q91V04 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tram1Q91V04 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tram1Q91V04 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tram1Q91V04 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tram1Q91V04 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tram1Q91V04 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tram1Q91V04 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tram1Q91V04 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Tram1Q91V04 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tram1Q91V04 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tram1Q91V04 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tram1Q91V04 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.46□□□□□ -0.57
Tram1Q91V04 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.46□□□□□ -0.57
Tram1Q91V04 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.46□□□□□ -0.57
Tram1Q91V04 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tram1Q91V04 Mir5131-201ENSMUST00000175426 93 ntBASIC11.46□□□□□ -0.57
Tram1Q91V04 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC11.46□□□□□ -0.57
Tram1Q91V04 Gm27631-201ENSMUST00000184163 466 ntBASIC11.46□□□□□ -0.57
Tram1Q91V04 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.46□□□□□ -0.57
Tram1Q91V04 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tram1Q91V04 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.46□□□□□ -0.57
Tram1Q91V04 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.46□□□□□ -0.57
Tram1Q91V04 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tram1Q91V04 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tram1Q91V04 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Tram1Q91V04 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tram1Q91V04 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tram1Q91V04 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.46□□□□□ -0.58
Tram1Q91V04 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tram1Q91V04 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms