Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm4768-201ENSMUST00000206199 686 ntBASIC14.21□□□□□ -0.13
TraipQ8VIG6 Gm7399-201ENSMUST00000032395 858 ntBASIC14.21□□□□□ -0.13
TraipQ8VIG6 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TraipQ8VIG6 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TraipQ8VIG6 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TraipQ8VIG6 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TraipQ8VIG6 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
TraipQ8VIG6 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TraipQ8VIG6 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.21□□□□□ -0.13
TraipQ8VIG6 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TraipQ8VIG6 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.21□□□□□ -0.14
TraipQ8VIG6 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
TraipQ8VIG6 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TraipQ8VIG6 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
TraipQ8VIG6 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TraipQ8VIG6 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TraipQ8VIG6 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.21□□□□□ -0.14
TraipQ8VIG6 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TraipQ8VIG6 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TraipQ8VIG6 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.2□□□□□ -0.14
TraipQ8VIG6 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TraipQ8VIG6 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.2□□□□□ -0.14
TraipQ8VIG6 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.2□□□□□ -0.14
TraipQ8VIG6 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TraipQ8VIG6 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TraipQ8VIG6 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TraipQ8VIG6 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TraipQ8VIG6 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TraipQ8VIG6 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.2□□□□□ -0.14
TraipQ8VIG6 Gm15198-201ENSMUST00000117283 177 ntBASIC14.2□□□□□ -0.14
TraipQ8VIG6 Gm8805-201ENSMUST00000117848 313 ntBASIC14.2□□□□□ -0.14
TraipQ8VIG6 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
TraipQ8VIG6 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.2□□□□□ -0.14
TraipQ8VIG6 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.2□□□□□ -0.14
TraipQ8VIG6 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
TraipQ8VIG6 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
TraipQ8VIG6 Gm28693-202ENSMUST00000190758 331 ntBASIC14.2□□□□□ -0.14
TraipQ8VIG6 Gm43118-201ENSMUST00000199149 775 ntBASIC14.2□□□□□ -0.14
TraipQ8VIG6 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TraipQ8VIG6 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
TraipQ8VIG6 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TraipQ8VIG6 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TraipQ8VIG6 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
TraipQ8VIG6 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.2□□□□□ -0.14
TraipQ8VIG6 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TraipQ8VIG6 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TraipQ8VIG6 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TraipQ8VIG6 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
TraipQ8VIG6 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.2□□□□□ -0.14
TraipQ8VIG6 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TraipQ8VIG6 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TraipQ8VIG6 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TraipQ8VIG6 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TraipQ8VIG6 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TraipQ8VIG6 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.19□□□□□ -0.14
TraipQ8VIG6 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TraipQ8VIG6 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TraipQ8VIG6 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TraipQ8VIG6 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TraipQ8VIG6 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TraipQ8VIG6 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TraipQ8VIG6 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TraipQ8VIG6 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TraipQ8VIG6 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TraipQ8VIG6 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TraipQ8VIG6 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.19□□□□□ -0.14
TraipQ8VIG6 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TraipQ8VIG6 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.19□□□□□ -0.14
TraipQ8VIG6 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.19□□□□□ -0.14
TraipQ8VIG6 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.19□□□□□ -0.14
TraipQ8VIG6 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TraipQ8VIG6 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.19□□□□□ -0.14
TraipQ8VIG6 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.19□□□□□ -0.14
TraipQ8VIG6 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TraipQ8VIG6 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
TraipQ8VIG6 Gm27572-201ENSMUST00000183702 255 ntBASIC14.19□□□□□ -0.14
TraipQ8VIG6 Gm37008-201ENSMUST00000195712 319 ntBASIC14.19□□□□□ -0.14
TraipQ8VIG6 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.19□□□□□ -0.14
TraipQ8VIG6 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.19□□□□□ -0.14
TraipQ8VIG6 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TraipQ8VIG6 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TraipQ8VIG6 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TraipQ8VIG6 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TraipQ8VIG6 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TraipQ8VIG6 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.19□□□□□ -0.14
TraipQ8VIG6 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TraipQ8VIG6 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TraipQ8VIG6 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.19□□□□□ -0.14
TraipQ8VIG6 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TraipQ8VIG6 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TraipQ8VIG6 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TraipQ8VIG6 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.19□□□□□ -0.14
TraipQ8VIG6 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TraipQ8VIG6 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TraipQ8VIG6 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TraipQ8VIG6 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TraipQ8VIG6 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TraipQ8VIG6 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TraipQ8VIG6 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TraipQ8VIG6 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms