Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Pcdh18Q8VHR0 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh18Q8VHR0 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh18Q8VHR0 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh18Q8VHR0 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh18Q8VHR0 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.91□□□□□ -0.34
Pcdh18Q8VHR0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.91□□□□□ -0.34
Pcdh18Q8VHR0 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh18Q8VHR0 Gm27631-201ENSMUST00000184163 466 ntBASIC12.91□□□□□ -0.34
Pcdh18Q8VHR0 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdh18Q8VHR0 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdh18Q8VHR0 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh18Q8VHR0 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh18Q8VHR0 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh18Q8VHR0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh18Q8VHR0 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh18Q8VHR0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdh18Q8VHR0 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh18Q8VHR0 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh18Q8VHR0 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.91□□□□□ -0.34
Pcdh18Q8VHR0 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh18Q8VHR0 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh18Q8VHR0 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh18Q8VHR0 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdh18Q8VHR0 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdh18Q8VHR0 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Pcdh18Q8VHR0 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Pcdh18Q8VHR0 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh18Q8VHR0 Syt7-205ENSMUST00000224135 1557 ntBASIC12.9□□□□□ -0.34
Pcdh18Q8VHR0 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh18Q8VHR0 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh18Q8VHR0 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh18Q8VHR0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Pcdh18Q8VHR0 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh18Q8VHR0 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Pcdh18Q8VHR0 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Pcdh18Q8VHR0 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh18Q8VHR0 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdh18Q8VHR0 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh18Q8VHR0 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh18Q8VHR0 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.9□□□□□ -0.34
Pcdh18Q8VHR0 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh18Q8VHR0 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh18Q8VHR0 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh18Q8VHR0 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh18Q8VHR0 Gm14822-201ENSMUST00000122247 291 ntBASIC12.9□□□□□ -0.34
Pcdh18Q8VHR0 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.9□□□□□ -0.34
Pcdh18Q8VHR0 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Pcdh18Q8VHR0 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh18Q8VHR0 Gm45453-201ENSMUST00000211758 853 ntBASIC12.9□□□□□ -0.34
Pcdh18Q8VHR0 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pcdh18Q8VHR0 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh18Q8VHR0 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Pcdh18Q8VHR0 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh18Q8VHR0 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh18Q8VHR0 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh18Q8VHR0 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh18Q8VHR0 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh18Q8VHR0 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh18Q8VHR0 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdh18Q8VHR0 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdh18Q8VHR0 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdh18Q8VHR0 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Gm6736-201ENSMUST00000166583 948 ntBASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Gm24158-201ENSMUST00000175263 71 ntBASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Gm43474-201ENSMUST00000196415 774 ntBASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms