Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ndc1Q8VCB1 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Gm29649-201ENSMUST00000185649 419 ntBASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Gm29608-201ENSMUST00000190444 463 ntBASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Gm18473-201ENSMUST00000220543 868 ntBASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Gm17330-201ENSMUST00000221047 165 ntBASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.6□□□□□ -0.39
Ndc1Q8VCB1 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Gm13226-201ENSMUST00000117838 404 ntBASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Gm6152-201ENSMUST00000151704 340 ntBASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ndc1Q8VCB1 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms