Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm1Q8VC85 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm1Q8VC85 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.83□□□□□ -0.36
Lsm1Q8VC85 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.83□□□□□ -0.36
Lsm1Q8VC85 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.83□□□□□ -0.36
Lsm1Q8VC85 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm1Q8VC85 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm1Q8VC85 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm1Q8VC85 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm1Q8VC85 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm1Q8VC85 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm1Q8VC85 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.83□□□□□ -0.36
Lsm1Q8VC85 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Lsm1Q8VC85 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm1Q8VC85 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm1Q8VC85 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm1Q8VC85 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm1Q8VC85 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm1Q8VC85 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm1Q8VC85 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm1Q8VC85 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Gm9522-201ENSMUST00000182394 926 ntBASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Gm5161-201ENSMUST00000075243 853 ntBASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm1Q8VC85 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Gm21854-201ENSMUST00000179901 471 ntBASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm1Q8VC85 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms