Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Usp33Q8R5K2 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp33Q8R5K2 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp33Q8R5K2 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.36■□□□□ 0.05
Usp33Q8R5K2 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Usp33Q8R5K2 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp33Q8R5K2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp33Q8R5K2 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Usp33Q8R5K2 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Usp33Q8R5K2 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.36■□□□□ 0.05
Usp33Q8R5K2 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Usp33Q8R5K2 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
Usp33Q8R5K2 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Usp33Q8R5K2 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC15.36■□□□□ 0.05
Usp33Q8R5K2 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC15.36■□□□□ 0.05
Usp33Q8R5K2 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.36■□□□□ 0.05
Usp33Q8R5K2 Gm18753-201ENSMUST00000201000 566 ntBASIC15.36■□□□□ 0.05
Usp33Q8R5K2 Gm3786-201ENSMUST00000202659 378 ntBASIC15.36■□□□□ 0.05
Usp33Q8R5K2 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC15.36■□□□□ 0.05
Usp33Q8R5K2 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp33Q8R5K2 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Usp33Q8R5K2 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp33Q8R5K2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp33Q8R5K2 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.36■□□□□ 0.05
Usp33Q8R5K2 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Usp33Q8R5K2 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp33Q8R5K2 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Usp33Q8R5K2 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Usp33Q8R5K2 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp33Q8R5K2 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp33Q8R5K2 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp33Q8R5K2 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Usp33Q8R5K2 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Usp33Q8R5K2 Gm3756-201ENSMUST00000169182 1355 ntBASIC15.36■□□□□ 0.05
Usp33Q8R5K2 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp33Q8R5K2 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Gm22323-201ENSMUST00000103832 109 ntBASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Gm4986-201ENSMUST00000119731 549 ntBASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Gm11591-201ENSMUST00000120063 702 ntBASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Gm13297-201ENSMUST00000120205 934 ntBASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Gm2231-201ENSMUST00000125661 612 ntBASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Gm7809-201ENSMUST00000153199 742 ntBASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Usp33Q8R5K2 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Usp33Q8R5K2 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Usp33Q8R5K2 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp33Q8R5K2 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Usp33Q8R5K2 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
Usp33Q8R5K2 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Usp33Q8R5K2 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Usp33Q8R5K2 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Usp33Q8R5K2 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp33Q8R5K2 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Usp33Q8R5K2 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Usp33Q8R5K2 Gm2383-201ENSMUST00000181461 807 ntBASIC15.34■□□□□ 0.05
Usp33Q8R5K2 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Usp33Q8R5K2 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.34■□□□□ 0.05
Usp33Q8R5K2 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC15.34■□□□□ 0.05
Usp33Q8R5K2 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC15.34■□□□□ 0.05
Usp33Q8R5K2 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC15.34■□□□□ 0.05
Usp33Q8R5K2 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp33Q8R5K2 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Usp33Q8R5K2 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp33Q8R5K2 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Usp33Q8R5K2 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Usp33Q8R5K2 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp33Q8R5K2 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp33Q8R5K2 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp33Q8R5K2 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp33Q8R5K2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp33Q8R5K2 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms