Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Gm27631-201ENSMUST00000184163 466 ntBASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Gm18049-201ENSMUST00000208909 581 ntBASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Gm10819-201ENSMUST00000099988 561 ntBASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc58Q8R3Q6 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc58Q8R3Q6 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc58Q8R3Q6 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ccdc58Q8R3Q6 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.97□□□□□ -0.49
Ccdc58Q8R3Q6 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc58Q8R3Q6 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc58Q8R3Q6 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc58Q8R3Q6 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc58Q8R3Q6 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.97□□□□□ -0.49
Ccdc58Q8R3Q6 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.97□□□□□ -0.49
Ccdc58Q8R3Q6 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc58Q8R3Q6 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc58Q8R3Q6 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc58Q8R3Q6 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.97□□□□□ -0.49
Ccdc58Q8R3Q6 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.97□□□□□ -0.49
Ccdc58Q8R3Q6 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC11.97□□□□□ -0.49
Ccdc58Q8R3Q6 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc58Q8R3Q6 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc58Q8R3Q6 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc58Q8R3Q6 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc58Q8R3Q6 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.97□□□□□ -0.49
Ccdc58Q8R3Q6 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc58Q8R3Q6 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc58Q8R3Q6 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc58Q8R3Q6 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc58Q8R3Q6 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc58Q8R3Q6 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc58Q8R3Q6 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc58Q8R3Q6 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.97□□□□□ -0.49
Ccdc58Q8R3Q6 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms