Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nudcd3Q8R1N4 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nudcd3Q8R1N4 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nudcd3Q8R1N4 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Nudcd3Q8R1N4 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nudcd3Q8R1N4 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Nudcd3Q8R1N4 Gm24543-201ENSMUST00000103867 82 ntBASIC13.34□□□□□ -0.27
Nudcd3Q8R1N4 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nudcd3Q8R1N4 Gm11779-201ENSMUST00000118541 368 ntBASIC13.34□□□□□ -0.27
Nudcd3Q8R1N4 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.34□□□□□ -0.27
Nudcd3Q8R1N4 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.34□□□□□ -0.27
Nudcd3Q8R1N4 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.34□□□□□ -0.27
Nudcd3Q8R1N4 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.34□□□□□ -0.27
Nudcd3Q8R1N4 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nudcd3Q8R1N4 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nudcd3Q8R1N4 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nudcd3Q8R1N4 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.34□□□□□ -0.27
Nudcd3Q8R1N4 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nudcd3Q8R1N4 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nudcd3Q8R1N4 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nudcd3Q8R1N4 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nudcd3Q8R1N4 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nudcd3Q8R1N4 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nudcd3Q8R1N4 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nudcd3Q8R1N4 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nudcd3Q8R1N4 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nudcd3Q8R1N4 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nudcd3Q8R1N4 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Gm15770-201ENSMUST00000117498 584 ntBASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Mir1897-201ENSMUST00000122581 272 ntBASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Mir6990-201ENSMUST00000183724 91 ntBASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Gm43125-201ENSMUST00000201724 730 ntBASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Gm18206-201ENSMUST00000207027 926 ntBASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms