Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 AL645783.1-201ENSMUST00000221416 1832 ntBASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Gm11400-201ENSMUST00000120853 1214 ntBASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Gm15163-201ENSMUST00000120749 1302 ntBASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Gm42928-201ENSMUST00000197338 3339 ntBASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sf3a1Q8K4Z5 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Sf3a1Q8K4Z5 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.33■□□□□ 0.21
Sf3a1Q8K4Z5 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sf3a1Q8K4Z5 Gm4782-201ENSMUST00000168705 2046 ntBASIC16.33■□□□□ 0.21
Sf3a1Q8K4Z5 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sf3a1Q8K4Z5 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sf3a1Q8K4Z5 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sf3a1Q8K4Z5 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Sf3a1Q8K4Z5 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sf3a1Q8K4Z5 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sf3a1Q8K4Z5 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sf3a1Q8K4Z5 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Sf3a1Q8K4Z5 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sf3a1Q8K4Z5 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sf3a1Q8K4Z5 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sf3a1Q8K4Z5 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.33■□□□□ 0.2
Sf3a1Q8K4Z5 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC16.33■□□□□ 0.2
Sf3a1Q8K4Z5 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sf3a1Q8K4Z5 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sf3a1Q8K4Z5 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC16.33■□□□□ 0.2
Sf3a1Q8K4Z5 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Sf3a1Q8K4Z5 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sf3a1Q8K4Z5 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sf3a1Q8K4Z5 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Sf3a1Q8K4Z5 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Sf3a1Q8K4Z5 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Sf3a1Q8K4Z5 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sf3a1Q8K4Z5 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sf3a1Q8K4Z5 AC154262.2-201ENSMUST00000224310 2293 ntBASIC16.33■□□□□ 0.2
Sf3a1Q8K4Z5 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sf3a1Q8K4Z5 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sf3a1Q8K4Z5 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sf3a1Q8K4Z5 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sf3a1Q8K4Z5 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sf3a1Q8K4Z5 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sf3a1Q8K4Z5 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Sf3a1Q8K4Z5 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Sf3a1Q8K4Z5 Mir692-1-201ENSMUST00000102263 109 ntBASIC16.32■□□□□ 0.2
Sf3a1Q8K4Z5 Gm5687-201ENSMUST00000118252 640 ntBASIC16.32■□□□□ 0.2
Sf3a1Q8K4Z5 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sf3a1Q8K4Z5 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC16.32■□□□□ 0.2
Sf3a1Q8K4Z5 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC16.32■□□□□ 0.2
Sf3a1Q8K4Z5 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sf3a1Q8K4Z5 Mypopos-202ENSMUST00000205975 2321 ntBASIC16.32■□□□□ 0.2
Sf3a1Q8K4Z5 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.32■□□□□ 0.2
Sf3a1Q8K4Z5 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC16.32■□□□□ 0.2
Sf3a1Q8K4Z5 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sf3a1Q8K4Z5 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sf3a1Q8K4Z5 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sf3a1Q8K4Z5 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sf3a1Q8K4Z5 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sf3a1Q8K4Z5 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sf3a1Q8K4Z5 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sf3a1Q8K4Z5 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sf3a1Q8K4Z5 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sf3a1Q8K4Z5 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Sf3a1Q8K4Z5 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a1Q8K4Z5 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a1Q8K4Z5 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a1Q8K4Z5 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a1Q8K4Z5 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a1Q8K4Z5 Gm43364-201ENSMUST00000196046 3274 ntBASIC16.31■□□□□ 0.2
Sf3a1Q8K4Z5 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms