Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Ebf4Q8K4J2 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Ebf4Q8K4J2 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ebf4Q8K4J2 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Ebf4Q8K4J2 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ebf4Q8K4J2 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Ebf4Q8K4J2 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Gm11543-201ENSMUST00000120758 370 ntBASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf4Q8K4J2 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Gm5364-201ENSMUST00000216789 889 ntBASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Ebf4Q8K4J2 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms