Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
Cystm1Q8K353 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cystm1Q8K353 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cystm1Q8K353 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC8.4□□□□□ -1.06
Cystm1Q8K353 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Gm13365-201ENSMUST00000121188 973 ntBASIC8.4□□□□□ -1.06
Cystm1Q8K353 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Gm44335-201ENSMUST00000196879 141 ntBASIC8.4□□□□□ -1.06
Cystm1Q8K353 Gm44297-201ENSMUST00000198304 141 ntBASIC8.4□□□□□ -1.06
Cystm1Q8K353 Gm44346-201ENSMUST00000198851 141 ntBASIC8.4□□□□□ -1.06
Cystm1Q8K353 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Cystm1Q8K353 AC159114.1-201ENSMUST00000220349 266 ntBASIC8.4□□□□□ -1.06
Cystm1Q8K353 AC124732.2-201ENSMUST00000221977 316 ntBASIC8.4□□□□□ -1.06
Cystm1Q8K353 CT025555.1-201ENSMUST00000225901 1217 ntBASIC8.4□□□□□ -1.06
Cystm1Q8K353 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cystm1Q8K353 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Cystm1Q8K353 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Cystm1Q8K353 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.07
Cystm1Q8K353 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Cystm1Q8K353 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Cystm1Q8K353 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Cystm1Q8K353 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC8.4□□□□□ -1.07
Cystm1Q8K353 Gm37368-201ENSMUST00000193173 3212 ntBASIC8.4□□□□□ -1.07
Cystm1Q8K353 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Cystm1Q8K353 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.07
Cystm1Q8K353 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.07
Cystm1Q8K353 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
Cystm1Q8K353 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Cystm1Q8K353 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Cystm1Q8K353 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC8.4□□□□□ -1.07
Cystm1Q8K353 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Gm10548-201ENSMUST00000097631 2629 ntBASIC8.39□□□□□ -1.07
Cystm1Q8K353 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cystm1Q8K353 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cystm1Q8K353 Gm13616-201ENSMUST00000120600 222 ntBASIC8.39□□□□□ -1.07
Cystm1Q8K353 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC8.39□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms