Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cchcr1Q8K2I2 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cchcr1Q8K2I2 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cchcr1Q8K2I2 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cchcr1Q8K2I2 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cchcr1Q8K2I2 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cchcr1Q8K2I2 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cchcr1Q8K2I2 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cchcr1Q8K2I2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cchcr1Q8K2I2 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.81■□□□□ 0.12
Cchcr1Q8K2I2 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.81■□□□□ 0.12
Cchcr1Q8K2I2 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.81■□□□□ 0.12
Cchcr1Q8K2I2 Gm44872-201ENSMUST00000207864 420 ntBASIC15.81■□□□□ 0.12
Cchcr1Q8K2I2 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.81■□□□□ 0.12
Cchcr1Q8K2I2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cchcr1Q8K2I2 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cchcr1Q8K2I2 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.81■□□□□ 0.12
Cchcr1Q8K2I2 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cchcr1Q8K2I2 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Gm15487-201ENSMUST00000122373 465 ntBASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Gm7002-201ENSMUST00000221386 2165 ntBASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cchcr1Q8K2I2 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Gm5989-201ENSMUST00000096092 2077 ntBASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Gm11524-201ENSMUST00000119349 807 ntBASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Gm24694-201ENSMUST00000180054 110 ntBASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Gm27663-201ENSMUST00000184839 110 ntBASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Gm29667-201ENSMUST00000190817 490 ntBASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Gm43094-201ENSMUST00000196549 921 ntBASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Gm19078-201ENSMUST00000206311 727 ntBASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Gm9797-201ENSMUST00000052902 613 ntBASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms