Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CopaQ8CIE6 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Gm13385-201ENSMUST00000121089 220 ntBASIC13.65□□□□□ -0.22
CopaQ8CIE6 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CopaQ8CIE6 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CopaQ8CIE6 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CopaQ8CIE6 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CopaQ8CIE6 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CopaQ8CIE6 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.65□□□□□ -0.22
CopaQ8CIE6 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CopaQ8CIE6 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CopaQ8CIE6 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Gm13829-201ENSMUST00000119600 138 ntBASIC13.64□□□□□ -0.23
CopaQ8CIE6 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.64□□□□□ -0.23
CopaQ8CIE6 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.64□□□□□ -0.23
CopaQ8CIE6 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CopaQ8CIE6 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.64□□□□□ -0.23
CopaQ8CIE6 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Gm17150-201ENSMUST00000165577 381 ntBASIC13.64□□□□□ -0.23
CopaQ8CIE6 Gm8927-201ENSMUST00000181978 981 ntBASIC13.64□□□□□ -0.23
CopaQ8CIE6 Gm43094-201ENSMUST00000196549 921 ntBASIC13.64□□□□□ -0.23
CopaQ8CIE6 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CopaQ8CIE6 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Gm3222-201ENSMUST00000071282 990 ntBASIC13.64□□□□□ -0.23
CopaQ8CIE6 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CopaQ8CIE6 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CopaQ8CIE6 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopaQ8CIE6 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopaQ8CIE6 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CopaQ8CIE6 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopaQ8CIE6 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopaQ8CIE6 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopaQ8CIE6 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.63□□□□□ -0.23
CopaQ8CIE6 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopaQ8CIE6 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CopaQ8CIE6 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopaQ8CIE6 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.63□□□□□ -0.23
CopaQ8CIE6 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.63□□□□□ -0.23
CopaQ8CIE6 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.63□□□□□ -0.23
CopaQ8CIE6 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopaQ8CIE6 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopaQ8CIE6 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopaQ8CIE6 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CopaQ8CIE6 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms