Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ShfQ8CG80 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ShfQ8CG80 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ShfQ8CG80 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ShfQ8CG80 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ShfQ8CG80 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ShfQ8CG80 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.92□□□□□ -0.5
ShfQ8CG80 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ShfQ8CG80 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.92□□□□□ -0.5
ShfQ8CG80 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ShfQ8CG80 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
ShfQ8CG80 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ShfQ8CG80 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ShfQ8CG80 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ShfQ8CG80 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ShfQ8CG80 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.92□□□□□ -0.5
ShfQ8CG80 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ShfQ8CG80 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ShfQ8CG80 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
ShfQ8CG80 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
ShfQ8CG80 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ShfQ8CG80 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ShfQ8CG80 Gm6736-201ENSMUST00000166583 948 ntBASIC11.92□□□□□ -0.5
ShfQ8CG80 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ShfQ8CG80 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ShfQ8CG80 Gm27702-201ENSMUST00000184512 56 ntBASIC11.92□□□□□ -0.5
ShfQ8CG80 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ShfQ8CG80 Gm19931-201ENSMUST00000198920 368 ntBASIC11.92□□□□□ -0.5
ShfQ8CG80 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.92□□□□□ -0.5
ShfQ8CG80 AC132104.2-201ENSMUST00000215011 266 ntBASIC11.92□□□□□ -0.5
ShfQ8CG80 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ShfQ8CG80 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.92□□□□□ -0.5
ShfQ8CG80 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ShfQ8CG80 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ShfQ8CG80 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.92□□□□□ -0.5
ShfQ8CG80 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
ShfQ8CG80 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ShfQ8CG80 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ShfQ8CG80 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ShfQ8CG80 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
ShfQ8CG80 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.92□□□□□ -0.5
ShfQ8CG80 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ShfQ8CG80 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ShfQ8CG80 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ShfQ8CG80 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
ShfQ8CG80 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ShfQ8CG80 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.91□□□□□ -0.5
ShfQ8CG80 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ShfQ8CG80 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
ShfQ8CG80 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ShfQ8CG80 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.91□□□□□ -0.5
ShfQ8CG80 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
ShfQ8CG80 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
ShfQ8CG80 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ShfQ8CG80 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ShfQ8CG80 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ShfQ8CG80 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ShfQ8CG80 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.91□□□□□ -0.5
ShfQ8CG80 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ShfQ8CG80 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ShfQ8CG80 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ShfQ8CG80 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.91□□□□□ -0.5
ShfQ8CG80 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
ShfQ8CG80 Gm26308-201ENSMUST00000157768 69 ntBASIC11.91□□□□□ -0.5
ShfQ8CG80 Gm17837-201ENSMUST00000186435 985 ntBASIC11.91□□□□□ -0.5
ShfQ8CG80 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
ShfQ8CG80 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.91□□□□□ -0.5
ShfQ8CG80 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ShfQ8CG80 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ShfQ8CG80 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.91□□□□□ -0.5
ShfQ8CG80 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ShfQ8CG80 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
ShfQ8CG80 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ShfQ8CG80 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
ShfQ8CG80 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ShfQ8CG80 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ShfQ8CG80 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ShfQ8CG80 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.91□□□□□ -0.5
ShfQ8CG80 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ShfQ8CG80 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ShfQ8CG80 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ShfQ8CG80 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
ShfQ8CG80 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.91□□□□□ -0.5
ShfQ8CG80 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ShfQ8CG80 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ShfQ8CG80 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ShfQ8CG80 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ShfQ8CG80 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
ShfQ8CG80 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ShfQ8CG80 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ShfQ8CG80 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ShfQ8CG80 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.9□□□□□ -0.5
ShfQ8CG80 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
ShfQ8CG80 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
ShfQ8CG80 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ShfQ8CG80 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ShfQ8CG80 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
ShfQ8CG80 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
ShfQ8CG80 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ShfQ8CG80 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms