Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.02□□□□□ -0.33
Rab43Q8CG50 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Rab43Q8CG50 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab43Q8CG50 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab43Q8CG50 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab43Q8CG50 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab43Q8CG50 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rab43Q8CG50 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab43Q8CG50 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
Rab43Q8CG50 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab43Q8CG50 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab43Q8CG50 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab43Q8CG50 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Rab43Q8CG50 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab43Q8CG50 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.02□□□□□ -0.33
Rab43Q8CG50 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab43Q8CG50 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab43Q8CG50 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab43Q8CG50 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.01□□□□□ -0.33
Rab43Q8CG50 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.01□□□□□ -0.33
Rab43Q8CG50 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Mir8109-201ENSMUST00000184375 117 ntBASIC13.01□□□□□ -0.33
Rab43Q8CG50 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Gm18935-201ENSMUST00000212692 664 ntBASIC13.01□□□□□ -0.33
Rab43Q8CG50 Gm45930-201ENSMUST00000221330 292 ntBASIC13.01□□□□□ -0.33
Rab43Q8CG50 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.01□□□□□ -0.33
Rab43Q8CG50 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.01□□□□□ -0.33
Rab43Q8CG50 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab43Q8CG50 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab43Q8CG50 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rab43Q8CG50 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab43Q8CG50 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab43Q8CG50 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab43Q8CG50 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Rab43Q8CG50 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Rab43Q8CG50 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rab43Q8CG50 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rab43Q8CG50 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rab43Q8CG50 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rab43Q8CG50 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13□□□□□ -0.33
Rab43Q8CG50 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab43Q8CG50 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13□□□□□ -0.33
Rab43Q8CG50 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab43Q8CG50 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab43Q8CG50 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rab43Q8CG50 Gm13342-201ENSMUST00000121055 207 ntBASIC13□□□□□ -0.33
Rab43Q8CG50 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13□□□□□ -0.33
Rab43Q8CG50 Gm44985-201ENSMUST00000206202 1016 ntBASIC13□□□□□ -0.33
Rab43Q8CG50 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13□□□□□ -0.33
Rab43Q8CG50 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rab43Q8CG50 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab43Q8CG50 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rab43Q8CG50 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab43Q8CG50 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Rab43Q8CG50 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Rab43Q8CG50 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab43Q8CG50 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab43Q8CG50 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rab43Q8CG50 Gm12500-202ENSMUST00000186471 2428 ntBASIC13□□□□□ -0.33
Rab43Q8CG50 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rab43Q8CG50 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rab43Q8CG50 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab43Q8CG50 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rab43Q8CG50 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab43Q8CG50 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rab43Q8CG50 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab43Q8CG50 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab43Q8CG50 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab43Q8CG50 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms