Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Gm13316-201ENSMUST00000140537 691 ntBASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Gm37986-201ENSMUST00000193285 383 ntBASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a6Q8C6K9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col6a6Q8C6K9 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Col6a6Q8C6K9 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Col6a6Q8C6K9 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.02□□□□□ -0.48
Col6a6Q8C6K9 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col6a6Q8C6K9 Gm8805-201ENSMUST00000117848 313 ntBASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Gm15782-201ENSMUST00000121073 445 ntBASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Gm14130-201ENSMUST00000118417 987 ntBASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Gm12217-201ENSMUST00000118858 696 ntBASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Gm22121-201ENSMUST00000175148 54 ntBASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Gm2260-201ENSMUST00000184965 657 ntBASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col6a6Q8C6K9 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Gm24830-201ENSMUST00000102024 166 ntBASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Gm25890-201ENSMUST00000177643 165 ntBASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Gm22614-201ENSMUST00000178300 165 ntBASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Gm19163-201ENSMUST00000223313 780 ntBASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Gm22042-201ENSMUST00000082989 165 ntBASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Gm26232-201ENSMUST00000083360 166 ntBASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Gm24136-201ENSMUST00000083374 165 ntBASIC12.01□□□□□ -0.49
Col6a6Q8C6K9 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms