Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptcd1Q8C2E4 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptcd1Q8C2E4 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptcd1Q8C2E4 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptcd1Q8C2E4 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ptcd1Q8C2E4 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Ptcd1Q8C2E4 Gm15770-201ENSMUST00000117498 584 ntBASIC16.41■□□□□ 0.22
Ptcd1Q8C2E4 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ptcd1Q8C2E4 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Ptcd1Q8C2E4 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC16.41■□□□□ 0.22
Ptcd1Q8C2E4 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ptcd1Q8C2E4 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC16.41■□□□□ 0.22
Ptcd1Q8C2E4 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC16.41■□□□□ 0.22
Ptcd1Q8C2E4 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC16.41■□□□□ 0.22
Ptcd1Q8C2E4 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptcd1Q8C2E4 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ptcd1Q8C2E4 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC16.41■□□□□ 0.22
Ptcd1Q8C2E4 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptcd1Q8C2E4 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptcd1Q8C2E4 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptcd1Q8C2E4 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ptcd1Q8C2E4 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Ptcd1Q8C2E4 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptcd1Q8C2E4 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptcd1Q8C2E4 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ptcd1Q8C2E4 Gm3756-201ENSMUST00000169182 1355 ntBASIC16.4■□□□□ 0.22
Ptcd1Q8C2E4 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptcd1Q8C2E4 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptcd1Q8C2E4 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptcd1Q8C2E4 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ptcd1Q8C2E4 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptcd1Q8C2E4 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptcd1Q8C2E4 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptcd1Q8C2E4 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptcd1Q8C2E4 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC16.4■□□□□ 0.22
Ptcd1Q8C2E4 Mospd4-201ENSMUST00000180618 576 ntBASIC16.4■□□□□ 0.22
Ptcd1Q8C2E4 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ptcd1Q8C2E4 Gm27341-201ENSMUST00000183570 106 ntBASIC16.4■□□□□ 0.22
Ptcd1Q8C2E4 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC16.4■□□□□ 0.22
Ptcd1Q8C2E4 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC16.4■□□□□ 0.22
Ptcd1Q8C2E4 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ptcd1Q8C2E4 n-R5s195-201ENSMUST00000082891 119 ntBASIC16.4■□□□□ 0.22
Ptcd1Q8C2E4 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptcd1Q8C2E4 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptcd1Q8C2E4 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptcd1Q8C2E4 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ptcd1Q8C2E4 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
Ptcd1Q8C2E4 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.4■□□□□ 0.22
Ptcd1Q8C2E4 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptcd1Q8C2E4 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ptcd1Q8C2E4 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptcd1Q8C2E4 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptcd1Q8C2E4 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptcd1Q8C2E4 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ptcd1Q8C2E4 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.22
Ptcd1Q8C2E4 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Gm21769-201ENSMUST00000211922 111 ntBASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 AC153961.1-201ENSMUST00000217760 385 ntBASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 AC166491.1-201ENSMUST00000227053 2308 ntBASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Ptcd1Q8C2E4 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms