Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Gm13689-201ENSMUST00000119360 685 ntBASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Gm12341-201ENSMUST00000119724 503 ntBASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Gm5866-201ENSMUST00000177881 973 ntBASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Gm28631-201ENSMUST00000190740 334 ntBASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf3Q8C120 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Sh3rf3Q8C120 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf3Q8C120 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf3Q8C120 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Sh3rf3Q8C120 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Sh3rf3Q8C120 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf3Q8C120 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf3Q8C120 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf3Q8C120 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf3Q8C120 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf3Q8C120 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf3Q8C120 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.92□□□□□ -0.18
Sh3rf3Q8C120 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Sh3rf3Q8C120 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf3Q8C120 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf3Q8C120 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.92□□□□□ -0.18
Sh3rf3Q8C120 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.92□□□□□ -0.18
Sh3rf3Q8C120 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf3Q8C120 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf3Q8C120 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.92□□□□□ -0.18
Sh3rf3Q8C120 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf3Q8C120 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Sh3rf3Q8C120 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf3Q8C120 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf3Q8C120 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf3Q8C120 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf3Q8C120 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf3Q8C120 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf3Q8C120 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms