Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.16□□□□□ -0.14
Trerf1Q8BXJ2 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trerf1Q8BXJ2 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trerf1Q8BXJ2 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trerf1Q8BXJ2 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trerf1Q8BXJ2 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trerf1Q8BXJ2 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trerf1Q8BXJ2 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trerf1Q8BXJ2 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trerf1Q8BXJ2 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trerf1Q8BXJ2 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trerf1Q8BXJ2 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trerf1Q8BXJ2 Gm4804-201ENSMUST00000182234 999 ntBASIC14.15□□□□□ -0.14
Trerf1Q8BXJ2 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.15□□□□□ -0.14
Trerf1Q8BXJ2 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.15□□□□□ -0.14
Trerf1Q8BXJ2 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trerf1Q8BXJ2 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trerf1Q8BXJ2 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trerf1Q8BXJ2 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trerf1Q8BXJ2 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trerf1Q8BXJ2 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trerf1Q8BXJ2 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trerf1Q8BXJ2 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trerf1Q8BXJ2 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trerf1Q8BXJ2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trerf1Q8BXJ2 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trerf1Q8BXJ2 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trerf1Q8BXJ2 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.15□□□□□ -0.15
Trerf1Q8BXJ2 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trerf1Q8BXJ2 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trerf1Q8BXJ2 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trerf1Q8BXJ2 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trerf1Q8BXJ2 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.14□□□□□ -0.15
Trerf1Q8BXJ2 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trerf1Q8BXJ2 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trerf1Q8BXJ2 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trerf1Q8BXJ2 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trerf1Q8BXJ2 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trerf1Q8BXJ2 Gm22189-201ENSMUST00000103822 86 ntBASIC14.14□□□□□ -0.15
Trerf1Q8BXJ2 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trerf1Q8BXJ2 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trerf1Q8BXJ2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.14□□□□□ -0.15
Trerf1Q8BXJ2 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.14□□□□□ -0.15
Trerf1Q8BXJ2 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trerf1Q8BXJ2 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trerf1Q8BXJ2 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trerf1Q8BXJ2 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trerf1Q8BXJ2 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trerf1Q8BXJ2 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trerf1Q8BXJ2 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trerf1Q8BXJ2 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trerf1Q8BXJ2 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trerf1Q8BXJ2 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trerf1Q8BXJ2 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Trerf1Q8BXJ2 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trerf1Q8BXJ2 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trerf1Q8BXJ2 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trerf1Q8BXJ2 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trerf1Q8BXJ2 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trerf1Q8BXJ2 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trerf1Q8BXJ2 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trerf1Q8BXJ2 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trerf1Q8BXJ2 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.13□□□□□ -0.15
Trerf1Q8BXJ2 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.13□□□□□ -0.15
Trerf1Q8BXJ2 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Trerf1Q8BXJ2 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.13□□□□□ -0.15
Trerf1Q8BXJ2 Gm8927-201ENSMUST00000181978 981 ntBASIC14.13□□□□□ -0.15
Trerf1Q8BXJ2 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.13□□□□□ -0.15
Trerf1Q8BXJ2 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.13□□□□□ -0.15
Trerf1Q8BXJ2 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.13□□□□□ -0.15
Trerf1Q8BXJ2 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trerf1Q8BXJ2 Gm3222-201ENSMUST00000071282 990 ntBASIC14.13□□□□□ -0.15
Trerf1Q8BXJ2 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trerf1Q8BXJ2 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trerf1Q8BXJ2 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trerf1Q8BXJ2 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trerf1Q8BXJ2 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trerf1Q8BXJ2 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trerf1Q8BXJ2 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trerf1Q8BXJ2 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trerf1Q8BXJ2 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.13□□□□□ -0.15
Trerf1Q8BXJ2 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trerf1Q8BXJ2 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trerf1Q8BXJ2 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 Gm21854-201ENSMUST00000179901 471 ntBASIC14.12□□□□□ -0.15
Trerf1Q8BXJ2 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms