Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Gm16372-201ENSMUST00000073088 450 ntBASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Gm4984-201ENSMUST00000115987 360 ntBASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Gm12390-201ENSMUST00000117897 397 ntBASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nup54Q8BTS4 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Gm29649-201ENSMUST00000185649 419 ntBASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Gm44069-201ENSMUST00000204898 506 ntBASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup54Q8BTS4 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup54Q8BTS4 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.65□□□□□ -0.23
Nup54Q8BTS4 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.23
Nup54Q8BTS4 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
Nup54Q8BTS4 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.64□□□□□ -0.23
Nup54Q8BTS4 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup54Q8BTS4 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Gm13829-201ENSMUST00000119600 138 ntBASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Gm22331-201ENSMUST00000158066 136 ntBASIC13.64□□□□□ -0.23
Nup54Q8BTS4 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Gm6266-201ENSMUST00000203844 806 ntBASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup54Q8BTS4 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup54Q8BTS4 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms