Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.14□□□□□ -0.15
Rd3Q8BRE0 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Gm26927-201ENSMUST00000182385 965 ntBASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Gm43133-201ENSMUST00000197472 463 ntBASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Gm3961-201ENSMUST00000204425 994 ntBASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Gm10608-202ENSMUST00000213924 676 ntBASIC14.14□□□□□ -0.15
Rd3Q8BRE0 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Rd3Q8BRE0 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Gm6447-201ENSMUST00000118905 835 ntBASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Gm25261-201ENSMUST00000157416 134 ntBASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Gm7584-201ENSMUST00000175829 940 ntBASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Gm44364-201ENSMUST00000198368 141 ntBASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Gm43118-201ENSMUST00000199149 775 ntBASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.13□□□□□ -0.15
Rd3Q8BRE0 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rd3Q8BRE0 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.12□□□□□ -0.15
Rd3Q8BRE0 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rd3Q8BRE0 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.12□□□□□ -0.15
Rd3Q8BRE0 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rd3Q8BRE0 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.12□□□□□ -0.15
Rd3Q8BRE0 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.12□□□□□ -0.15
Rd3Q8BRE0 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rd3Q8BRE0 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rd3Q8BRE0 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rd3Q8BRE0 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rd3Q8BRE0 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rd3Q8BRE0 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rd3Q8BRE0 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rd3Q8BRE0 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rd3Q8BRE0 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.12□□□□□ -0.15
Rd3Q8BRE0 Gm13350-201ENSMUST00000120519 479 ntBASIC14.12□□□□□ -0.15
Rd3Q8BRE0 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.12□□□□□ -0.15
Rd3Q8BRE0 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.12□□□□□ -0.15
Rd3Q8BRE0 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.12□□□□□ -0.15
Rd3Q8BRE0 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.12□□□□□ -0.15
Rd3Q8BRE0 Gm44069-201ENSMUST00000204898 506 ntBASIC14.12□□□□□ -0.15
Rd3Q8BRE0 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rd3Q8BRE0 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rd3Q8BRE0 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rd3Q8BRE0 Gm24526-201ENSMUST00000082921 158 ntBASIC14.12□□□□□ -0.15
Rd3Q8BRE0 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rd3Q8BRE0 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.12□□□□□ -0.15
Rd3Q8BRE0 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rd3Q8BRE0 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.12□□□□□ -0.15
Rd3Q8BRE0 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rd3Q8BRE0 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms