Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Usp54Q8BL06 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC18.63■□□□□ 0.57
Usp54Q8BL06 Gm8546-201ENSMUST00000178288 1264 ntBASIC18.63■□□□□ 0.57
Usp54Q8BL06 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC18.63■□□□□ 0.57
Usp54Q8BL06 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp54Q8BL06 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp54Q8BL06 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC18.63■□□□□ 0.57
Usp54Q8BL06 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC18.63■□□□□ 0.57
Usp54Q8BL06 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC18.63■□□□□ 0.57
Usp54Q8BL06 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Usp54Q8BL06 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp54Q8BL06 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp54Q8BL06 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Usp54Q8BL06 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Usp54Q8BL06 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp54Q8BL06 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Usp54Q8BL06 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp54Q8BL06 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp54Q8BL06 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC18.63■□□□□ 0.57
Usp54Q8BL06 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp54Q8BL06 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Usp54Q8BL06 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp54Q8BL06 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp54Q8BL06 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp54Q8BL06 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Usp54Q8BL06 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp54Q8BL06 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp54Q8BL06 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC18.62■□□□□ 0.57
Usp54Q8BL06 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp54Q8BL06 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Usp54Q8BL06 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp54Q8BL06 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp54Q8BL06 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp54Q8BL06 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Usp54Q8BL06 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp54Q8BL06 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp54Q8BL06 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
Usp54Q8BL06 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC18.62■□□□□ 0.57
Usp54Q8BL06 Gm7003-201ENSMUST00000195089 312 ntBASIC18.62■□□□□ 0.57
Usp54Q8BL06 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Usp54Q8BL06 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp54Q8BL06 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp54Q8BL06 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp54Q8BL06 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp54Q8BL06 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC18.62■□□□□ 0.57
Usp54Q8BL06 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Usp54Q8BL06 Gm43056-201ENSMUST00000197865 2791 ntBASIC18.62■□□□□ 0.57
Usp54Q8BL06 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp54Q8BL06 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp54Q8BL06 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp54Q8BL06 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp54Q8BL06 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp54Q8BL06 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp54Q8BL06 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp54Q8BL06 Gm43823-201ENSMUST00000197391 1808 ntBASIC18.61■□□□□ 0.57
Usp54Q8BL06 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp54Q8BL06 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Usp54Q8BL06 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp54Q8BL06 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp54Q8BL06 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC18.61■□□□□ 0.57
Usp54Q8BL06 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp54Q8BL06 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp54Q8BL06 Gm6963-201ENSMUST00000147879 379 ntBASIC18.61■□□□□ 0.57
Usp54Q8BL06 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
Usp54Q8BL06 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC18.61■□□□□ 0.57
Usp54Q8BL06 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp54Q8BL06 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp54Q8BL06 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp54Q8BL06 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp54Q8BL06 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp54Q8BL06 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp54Q8BL06 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Usp54Q8BL06 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp54Q8BL06 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp54Q8BL06 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC18.61■□□□□ 0.57
Usp54Q8BL06 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp54Q8BL06 Gm9025-201ENSMUST00000122415 1575 ntBASIC18.6■□□□□ 0.57
Usp54Q8BL06 AC113060.1-201ENSMUST00000225689 1573 ntBASIC18.6■□□□□ 0.57
Usp54Q8BL06 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp54Q8BL06 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp54Q8BL06 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp54Q8BL06 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp54Q8BL06 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp54Q8BL06 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Usp54Q8BL06 Gm13315-201ENSMUST00000120376 991 ntBASIC18.6■□□□□ 0.57
Usp54Q8BL06 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC18.6■□□□□ 0.57
Usp54Q8BL06 Gm5523-201ENSMUST00000180415 997 ntBASIC18.6■□□□□ 0.57
Usp54Q8BL06 Gm9555-201ENSMUST00000200908 583 ntBASIC18.6■□□□□ 0.57
Usp54Q8BL06 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp54Q8BL06 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC18.6■□□□□ 0.57
Usp54Q8BL06 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Usp54Q8BL06 CT009718.3-201ENSMUST00000221116 367 ntBASIC18.6■□□□□ 0.57
Usp54Q8BL06 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Usp54Q8BL06 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp54Q8BL06 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp54Q8BL06 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp54Q8BL06 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp54Q8BL06 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp54Q8BL06 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp54Q8BL06 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms