Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdhr3Q8BL00 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Mir7221-201ENSMUST00000184009 72 ntBASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Gm38294-201ENSMUST00000192831 381 ntBASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Gm18905-201ENSMUST00000205454 928 ntBASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Gm45841-201ENSMUST00000207700 164 ntBASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.66□□□□□ -0.54
Cdhr3Q8BL00 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Gm27618-201ENSMUST00000183671 60 ntBASIC11.65□□□□□ -0.54
Cdhr3Q8BL00 Gm27680-201ENSMUST00000184192 160 ntBASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms