Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.71□□□□□ -0.22
Chmp2bQ8BJF9 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.71□□□□□ -0.22
Chmp2bQ8BJF9 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chmp2bQ8BJF9 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chmp2bQ8BJF9 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Gm44344-201ENSMUST00000200287 129 ntBASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.7□□□□□ -0.22
Chmp2bQ8BJF9 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Gm12585-201ENSMUST00000117307 290 ntBASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Gm27702-201ENSMUST00000184512 56 ntBASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.69□□□□□ -0.22
Chmp2bQ8BJF9 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Gm3436-201ENSMUST00000179930 840 ntBASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms