Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Mir7684-201ENSMUST00000183858 60 ntBASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Gm15240-201ENSMUST00000118156 720 ntBASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Gm18905-201ENSMUST00000205454 928 ntBASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.98□□□□□ -0.17
Ccdc40Q8BI79 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 Mir8102-201ENSMUST00000184148 139 ntBASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 Gm27989-201ENSMUST00000184721 107 ntBASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 Gm27772-201ENSMUST00000184900 187 ntBASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc40Q8BI79 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms