Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Gm16202-201ENSMUST00000117532 544 ntBASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Gm11978-201ENSMUST00000122315 466 ntBASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4dQ8BGV9 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Gm8810-201ENSMUST00000172895 754 ntBASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4dQ8BGV9 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4dQ8BGV9 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4dQ8BGV9 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Atg4dQ8BGV9 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.41□□□□□ -0.42
Atg4dQ8BGV9 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4dQ8BGV9 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.41□□□□□ -0.42
Atg4dQ8BGV9 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.41□□□□□ -0.42
Atg4dQ8BGV9 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4dQ8BGV9 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4dQ8BGV9 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4dQ8BGV9 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.41□□□□□ -0.42
Atg4dQ8BGV9 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4dQ8BGV9 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4dQ8BGV9 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4dQ8BGV9 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms