Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm45384-201ENSMUST00000210451 277 ntBASIC13.2□□□□□ -0.3
Ubp1Q811S7 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ubp1Q811S7 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.2□□□□□ -0.3
Ubp1Q811S7 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubp1Q811S7 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ubp1Q811S7 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.2□□□□□ -0.3
Ubp1Q811S7 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubp1Q811S7 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ubp1Q811S7 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ubp1Q811S7 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.2□□□□□ -0.3
Ubp1Q811S7 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubp1Q811S7 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.2□□□□□ -0.3
Ubp1Q811S7 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubp1Q811S7 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.2□□□□□ -0.3
Ubp1Q811S7 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ubp1Q811S7 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ubp1Q811S7 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ubp1Q811S7 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ubp1Q811S7 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.19□□□□□ -0.3
Ubp1Q811S7 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ubp1Q811S7 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.19□□□□□ -0.3
Ubp1Q811S7 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ubp1Q811S7 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ubp1Q811S7 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.19□□□□□ -0.3
Ubp1Q811S7 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Ubp1Q811S7 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ubp1Q811S7 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ubp1Q811S7 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ubp1Q811S7 Gm12490-201ENSMUST00000120255 560 ntBASIC13.19□□□□□ -0.3
Ubp1Q811S7 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.19□□□□□ -0.3
Ubp1Q811S7 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.19□□□□□ -0.3
Ubp1Q811S7 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.19□□□□□ -0.3
Ubp1Q811S7 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ubp1Q811S7 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ubp1Q811S7 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ubp1Q811S7 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ubp1Q811S7 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ubp1Q811S7 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ubp1Q811S7 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ubp1Q811S7 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ubp1Q811S7 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Ubp1Q811S7 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ubp1Q811S7 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ubp1Q811S7 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ubp1Q811S7 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ubp1Q811S7 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubp1Q811S7 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubp1Q811S7 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubp1Q811S7 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubp1Q811S7 Gm42941-201ENSMUST00000200347 1321 ntBASIC13.18□□□□□ -0.3
Ubp1Q811S7 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubp1Q811S7 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubp1Q811S7 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubp1Q811S7 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubp1Q811S7 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ubp1Q811S7 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubp1Q811S7 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubp1Q811S7 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubp1Q811S7 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ubp1Q811S7 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Ubp1Q811S7 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.18□□□□□ -0.3
Ubp1Q811S7 Defa-ps4-201ENSMUST00000118021 183 ntBASIC13.18□□□□□ -0.3
Ubp1Q811S7 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubp1Q811S7 Gm11424-201ENSMUST00000121929 829 ntBASIC13.18□□□□□ -0.3
Ubp1Q811S7 Gm15429-201ENSMUST00000151268 798 ntBASIC13.18□□□□□ -0.3
Ubp1Q811S7 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubp1Q811S7 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.18□□□□□ -0.3
Ubp1Q811S7 Gm38223-201ENSMUST00000194484 695 ntBASIC13.18□□□□□ -0.3
Ubp1Q811S7 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.18□□□□□ -0.3
Ubp1Q811S7 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.18□□□□□ -0.3
Ubp1Q811S7 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ubp1Q811S7 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubp1Q811S7 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubp1Q811S7 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubp1Q811S7 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ubp1Q811S7 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubp1Q811S7 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubp1Q811S7 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ubp1Q811S7 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ubp1Q811S7 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ubp1Q811S7 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ubp1Q811S7 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.17□□□□□ -0.3
Ubp1Q811S7 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubp1Q811S7 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Gm28911-201ENSMUST00000188837 117 ntBASIC13.17□□□□□ -0.3
Ubp1Q811S7 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ubp1Q811S7 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms