Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nucks1Q80XU3 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nucks1Q80XU3 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nucks1Q80XU3 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nucks1Q80XU3 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nucks1Q80XU3 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nucks1Q80XU3 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nucks1Q80XU3 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Nucks1Q80XU3 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Nucks1Q80XU3 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nucks1Q80XU3 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nucks1Q80XU3 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nucks1Q80XU3 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nucks1Q80XU3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.28□□□□□ -0.12
Nucks1Q80XU3 Gm12485-201ENSMUST00000119641 291 ntBASIC14.28□□□□□ -0.12
Nucks1Q80XU3 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nucks1Q80XU3 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Nucks1Q80XU3 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.28□□□□□ -0.12
Nucks1Q80XU3 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nucks1Q80XU3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nucks1Q80XU3 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Nucks1Q80XU3 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nucks1Q80XU3 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nucks1Q80XU3 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nucks1Q80XU3 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.28□□□□□ -0.12
Nucks1Q80XU3 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
Nucks1Q80XU3 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nucks1Q80XU3 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nucks1Q80XU3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nucks1Q80XU3 Gm5867-201ENSMUST00000063197 592 ntBASIC14.28□□□□□ -0.12
Nucks1Q80XU3 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nucks1Q80XU3 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nucks1Q80XU3 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nucks1Q80XU3 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Nucks1Q80XU3 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nucks1Q80XU3 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Nucks1Q80XU3 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nucks1Q80XU3 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nucks1Q80XU3 Syt7-205ENSMUST00000224135 1557 ntBASIC14.27□□□□□ -0.12
Nucks1Q80XU3 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nucks1Q80XU3 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.27□□□□□ -0.12
Nucks1Q80XU3 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nucks1Q80XU3 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.27□□□□□ -0.12
Nucks1Q80XU3 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nucks1Q80XU3 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nucks1Q80XU3 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Nucks1Q80XU3 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nucks1Q80XU3 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Nucks1Q80XU3 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
Nucks1Q80XU3 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nucks1Q80XU3 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.27□□□□□ -0.13
Nucks1Q80XU3 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.27□□□□□ -0.13
Nucks1Q80XU3 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.27□□□□□ -0.13
Nucks1Q80XU3 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nucks1Q80XU3 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nucks1Q80XU3 Mir7684-201ENSMUST00000183858 60 ntBASIC14.27□□□□□ -0.13
Nucks1Q80XU3 Gm27838-201ENSMUST00000184829 128 ntBASIC14.27□□□□□ -0.13
Nucks1Q80XU3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nucks1Q80XU3 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nucks1Q80XU3 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nucks1Q80XU3 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nucks1Q80XU3 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.27□□□□□ -0.13
Nucks1Q80XU3 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nucks1Q80XU3 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nucks1Q80XU3 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nucks1Q80XU3 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nucks1Q80XU3 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Nucks1Q80XU3 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nucks1Q80XU3 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.27□□□□□ -0.13
Nucks1Q80XU3 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.27□□□□□ -0.13
Nucks1Q80XU3 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Nucks1Q80XU3 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nucks1Q80XU3 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nucks1Q80XU3 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nucks1Q80XU3 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nucks1Q80XU3 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nucks1Q80XU3 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nucks1Q80XU3 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nucks1Q80XU3 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nucks1Q80XU3 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nucks1Q80XU3 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Nucks1Q80XU3 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nucks1Q80XU3 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nucks1Q80XU3 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nucks1Q80XU3 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Nucks1Q80XU3 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.26□□□□□ -0.13
Nucks1Q80XU3 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nucks1Q80XU3 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nucks1Q80XU3 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nucks1Q80XU3 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nucks1Q80XU3 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nucks1Q80XU3 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Nucks1Q80XU3 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.26□□□□□ -0.13
Nucks1Q80XU3 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.26□□□□□ -0.13
Nucks1Q80XU3 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.26□□□□□ -0.13
Nucks1Q80XU3 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.26□□□□□ -0.13
Nucks1Q80XU3 Gm12403-201ENSMUST00000121384 959 ntBASIC14.26□□□□□ -0.13
Nucks1Q80XU3 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.26□□□□□ -0.13
Nucks1Q80XU3 Gm15487-201ENSMUST00000122373 465 ntBASIC14.26□□□□□ -0.13
Nucks1Q80XU3 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms