Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ush1gQ80T11 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ush1gQ80T11 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ush1gQ80T11 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ush1gQ80T11 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ush1gQ80T11 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.6□□□□□ -0.07
Ush1gQ80T11 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ush1gQ80T11 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
Ush1gQ80T11 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ush1gQ80T11 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.6□□□□□ -0.07
Ush1gQ80T11 Gm27682-201ENSMUST00000183930 110 ntBASIC14.6□□□□□ -0.07
Ush1gQ80T11 Gm29608-201ENSMUST00000190444 463 ntBASIC14.6□□□□□ -0.07
Ush1gQ80T11 Gm38144-201ENSMUST00000192790 465 ntBASIC14.6□□□□□ -0.07
Ush1gQ80T11 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Ush1gQ80T11 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.6□□□□□ -0.07
Ush1gQ80T11 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Ush1gQ80T11 Gm17330-201ENSMUST00000221047 165 ntBASIC14.6□□□□□ -0.07
Ush1gQ80T11 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ush1gQ80T11 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.6□□□□□ -0.07
Ush1gQ80T11 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ush1gQ80T11 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Ush1gQ80T11 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ush1gQ80T11 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ush1gQ80T11 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ush1gQ80T11 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ush1gQ80T11 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ush1gQ80T11 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ush1gQ80T11 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ush1gQ80T11 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ush1gQ80T11 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Ush1gQ80T11 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ush1gQ80T11 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ush1gQ80T11 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.59□□□□□ -0.07
Ush1gQ80T11 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.59□□□□□ -0.07
Ush1gQ80T11 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.59□□□□□ -0.07
Ush1gQ80T11 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.59□□□□□ -0.07
Ush1gQ80T11 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Ush1gQ80T11 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ush1gQ80T11 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.58□□□□□ -0.07
Ush1gQ80T11 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ush1gQ80T11 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ush1gQ80T11 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ush1gQ80T11 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ush1gQ80T11 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.58□□□□□ -0.08
Ush1gQ80T11 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ush1gQ80T11 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ush1gQ80T11 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ush1gQ80T11 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.58□□□□□ -0.08
Ush1gQ80T11 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ush1gQ80T11 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ush1gQ80T11 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.58□□□□□ -0.08
Ush1gQ80T11 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.58□□□□□ -0.08
Ush1gQ80T11 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.58□□□□□ -0.08
Ush1gQ80T11 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.58□□□□□ -0.08
Ush1gQ80T11 Gm13350-201ENSMUST00000120519 479 ntBASIC14.58□□□□□ -0.08
Ush1gQ80T11 Gm12403-201ENSMUST00000121384 959 ntBASIC14.58□□□□□ -0.08
Ush1gQ80T11 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.58□□□□□ -0.08
Ush1gQ80T11 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ush1gQ80T11 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ush1gQ80T11 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.58□□□□□ -0.08
Ush1gQ80T11 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ush1gQ80T11 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.58□□□□□ -0.08
Ush1gQ80T11 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.58□□□□□ -0.08
Ush1gQ80T11 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.58□□□□□ -0.08
Ush1gQ80T11 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.58□□□□□ -0.08
Ush1gQ80T11 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.58□□□□□ -0.08
Ush1gQ80T11 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.58□□□□□ -0.08
Ush1gQ80T11 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ush1gQ80T11 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms