Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf38bQ80SY5 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf38bQ80SY5 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Prpf38bQ80SY5 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf38bQ80SY5 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Prpf38bQ80SY5 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf38bQ80SY5 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf38bQ80SY5 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf38bQ80SY5 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Gm16177-201ENSMUST00000120728 718 ntBASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Gm36991-201ENSMUST00000191800 648 ntBASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Gm38671-201ENSMUST00000200573 130 ntBASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf38bQ80SY5 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38bQ80SY5 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Gm11524-201ENSMUST00000119349 807 ntBASIC14□□□□□ -0.17
Prpf38bQ80SY5 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
Prpf38bQ80SY5 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14□□□□□ -0.17
Prpf38bQ80SY5 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Gm19078-201ENSMUST00000206311 727 ntBASIC14□□□□□ -0.17
Prpf38bQ80SY5 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Prpf38bQ80SY5 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14□□□□□ -0.17
Prpf38bQ80SY5 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Prpf38bQ80SY5 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf38bQ80SY5 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Prpf38bQ80SY5 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf38bQ80SY5 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf38bQ80SY5 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf38bQ80SY5 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.99□□□□□ -0.17
Prpf38bQ80SY5 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.99□□□□□ -0.17
Prpf38bQ80SY5 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf38bQ80SY5 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.99□□□□□ -0.17
Prpf38bQ80SY5 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Prpf38bQ80SY5 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.99□□□□□ -0.17
Prpf38bQ80SY5 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf38bQ80SY5 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms