Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.36□□□□□ -0.43
Pif1Q80SX8 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Gm2445-201ENSMUST00000182798 989 ntBASIC12.36□□□□□ -0.43
Pif1Q80SX8 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Gm29608-201ENSMUST00000190444 463 ntBASIC12.36□□□□□ -0.43
Pif1Q80SX8 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.36□□□□□ -0.43
Pif1Q80SX8 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.36□□□□□ -0.43
Pif1Q80SX8 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Pif1Q80SX8 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.36□□□□□ -0.43
Pif1Q80SX8 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.35□□□□□ -0.43
Pif1Q80SX8 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pif1Q80SX8 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pif1Q80SX8 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pif1Q80SX8 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pif1Q80SX8 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pif1Q80SX8 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pif1Q80SX8 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pif1Q80SX8 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.35□□□□□ -0.43
Pif1Q80SX8 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pif1Q80SX8 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Pif1Q80SX8 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Pif1Q80SX8 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pif1Q80SX8 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pif1Q80SX8 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.35□□□□□ -0.43
Pif1Q80SX8 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.35□□□□□ -0.43
Pif1Q80SX8 Gm4271-201ENSMUST00000174444 973 ntBASIC12.35□□□□□ -0.43
Pif1Q80SX8 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pif1Q80SX8 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.35□□□□□ -0.43
Pif1Q80SX8 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.35□□□□□ -0.43
Pif1Q80SX8 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.35□□□□□ -0.43
Pif1Q80SX8 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.35□□□□□ -0.43
Pif1Q80SX8 Gm19309-201ENSMUST00000218295 205 ntBASIC12.35□□□□□ -0.43
Pif1Q80SX8 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pif1Q80SX8 Gm9823-201ENSMUST00000051212 327 ntBASIC12.35□□□□□ -0.43
Pif1Q80SX8 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pif1Q80SX8 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pif1Q80SX8 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pif1Q80SX8 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pif1Q80SX8 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Pif1Q80SX8 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pif1Q80SX8 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pif1Q80SX8 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pif1Q80SX8 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pif1Q80SX8 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.35□□□□□ -0.43
Pif1Q80SX8 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pif1Q80SX8 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pif1Q80SX8 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pif1Q80SX8 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.35□□□□□ -0.43
Pif1Q80SX8 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.34□□□□□ -0.43
Pif1Q80SX8 Gm27682-201ENSMUST00000183930 110 ntBASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms