Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vma21Q78T54 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vma21Q78T54 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vma21Q78T54 Gm6912-201ENSMUST00000117218 544 ntBASIC10.89□□□□□ -0.67
Vma21Q78T54 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Vma21Q78T54 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Vma21Q78T54 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Vma21Q78T54 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC10.89□□□□□ -0.67
Vma21Q78T54 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vma21Q78T54 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vma21Q78T54 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Vma21Q78T54 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Vma21Q78T54 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Vma21Q78T54 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Vma21Q78T54 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vma21Q78T54 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vma21Q78T54 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Vma21Q78T54 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Vma21Q78T54 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Vma21Q78T54 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Vma21Q78T54 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC10.89□□□□□ -0.67
Vma21Q78T54 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Vma21Q78T54 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vma21Q78T54 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Vma21Q78T54 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vma21Q78T54 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vma21Q78T54 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vma21Q78T54 Gm5320-201ENSMUST00000207163 1519 ntBASIC10.89□□□□□ -0.67
Vma21Q78T54 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vma21Q78T54 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vma21Q78T54 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Vma21Q78T54 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vma21Q78T54 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Vma21Q78T54 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.89□□□□□ -0.67
Vma21Q78T54 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Vma21Q78T54 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.88□□□□□ -0.67
Vma21Q78T54 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Vma21Q78T54 AC168058.1-201ENSMUST00000219521 2282 ntBASIC10.88□□□□□ -0.67
Vma21Q78T54 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Vma21Q78T54 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC10.88□□□□□ -0.67
Vma21Q78T54 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Vma21Q78T54 Gm14452-201ENSMUST00000118680 1632 ntBASIC10.88□□□□□ -0.67
Vma21Q78T54 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Gm44891-201ENSMUST00000208817 2223 ntBASIC10.88□□□□□ -0.67
Vma21Q78T54 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Vma21Q78T54 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC10.88□□□□□ -0.67
Vma21Q78T54 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC10.88□□□□□ -0.67
Vma21Q78T54 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC10.88□□□□□ -0.67
Vma21Q78T54 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC10.88□□□□□ -0.67
Vma21Q78T54 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC10.88□□□□□ -0.67
Vma21Q78T54 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.88□□□□□ -0.67
Vma21Q78T54 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Vma21Q78T54 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Vma21Q78T54 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Vma21Q78T54 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.87□□□□□ -0.67
Vma21Q78T54 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Vma21Q78T54 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC10.87□□□□□ -0.67
Vma21Q78T54 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms