Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 Gm12859-201ENSMUST00000117834 427 ntBASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 Gm43094-201ENSMUST00000196549 921 ntBASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Gm5354-201ENSMUST00000182417 973 ntBASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Gm15823-201ENSMUST00000064305 670 ntBASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.55□□□□□ -0.4
ParpbpQ6IRT3 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Gm15376-201ENSMUST00000122258 783 ntBASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Gm19220-201ENSMUST00000222682 803 ntBASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
ParpbpQ6IRT3 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms