Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn9aQ62205 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn9aQ62205 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Scn9aQ62205 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn9aQ62205 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn9aQ62205 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn9aQ62205 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Scn9aQ62205 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn9aQ62205 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scn9aQ62205 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn9aQ62205 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn9aQ62205 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn9aQ62205 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn9aQ62205 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scn9aQ62205 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn9aQ62205 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Scn9aQ62205 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Scn9aQ62205 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn9aQ62205 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn9aQ62205 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC15.4■□□□□ 0.06
Scn9aQ62205 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC15.4■□□□□ 0.06
Scn9aQ62205 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scn9aQ62205 Gm10752-201ENSMUST00000218348 729 ntBASIC15.4■□□□□ 0.06
Scn9aQ62205 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scn9aQ62205 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Scn9aQ62205 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
Scn9aQ62205 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Scn9aQ62205 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn9aQ62205 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Scn9aQ62205 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn9aQ62205 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Scn9aQ62205 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.39■□□□□ 0.05
Scn9aQ62205 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn9aQ62205 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn9aQ62205 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.39■□□□□ 0.05
Scn9aQ62205 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn9aQ62205 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn9aQ62205 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn9aQ62205 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Scn9aQ62205 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Scn9aQ62205 Gm13611-201ENSMUST00000118269 318 ntBASIC15.39■□□□□ 0.05
Scn9aQ62205 Gm12380-201ENSMUST00000119012 544 ntBASIC15.39■□□□□ 0.05
Scn9aQ62205 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC15.39■□□□□ 0.05
Scn9aQ62205 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Scn9aQ62205 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Scn9aQ62205 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC15.39■□□□□ 0.05
Scn9aQ62205 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC15.39■□□□□ 0.05
Scn9aQ62205 Ntng1-201ENSMUST00000051253 327 ntBASIC15.39■□□□□ 0.05
Scn9aQ62205 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn9aQ62205 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn9aQ62205 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn9aQ62205 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn9aQ62205 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn9aQ62205 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn9aQ62205 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Scn9aQ62205 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn9aQ62205 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Scn9aQ62205 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn9aQ62205 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Scn9aQ62205 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn9aQ62205 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn9aQ62205 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Scn9aQ62205 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.38■□□□□ 0.05
Scn9aQ62205 Mir7221-201ENSMUST00000184009 72 ntBASIC15.38■□□□□ 0.05
Scn9aQ62205 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC15.38■□□□□ 0.05
Scn9aQ62205 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC15.38■□□□□ 0.05
Scn9aQ62205 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC15.38■□□□□ 0.05
Scn9aQ62205 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn9aQ62205 Gzmn-202ENSMUST00000225535 989 ntBASIC15.38■□□□□ 0.05
Scn9aQ62205 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Scn9aQ62205 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn9aQ62205 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn9aQ62205 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
Scn9aQ62205 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn9aQ62205 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn9aQ62205 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.38■□□□□ 0.05
Scn9aQ62205 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn9aQ62205 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn9aQ62205 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.38■□□□□ 0.05
Scn9aQ62205 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Scn9aQ62205 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn9aQ62205 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Scn9aQ62205 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn9aQ62205 Gm12058-201ENSMUST00000118614 437 ntBASIC15.38■□□□□ 0.05
Scn9aQ62205 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC15.38■□□□□ 0.05
Scn9aQ62205 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC15.38■□□□□ 0.05
Scn9aQ62205 Gm43416-201ENSMUST00000201916 1015 ntBASIC15.38■□□□□ 0.05
Scn9aQ62205 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC15.38■□□□□ 0.05
Scn9aQ62205 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn9aQ62205 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn9aQ62205 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn9aQ62205 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Scn9aQ62205 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn9aQ62205 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn9aQ62205 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Scn9aQ62205 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Scn9aQ62205 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scn9aQ62205 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scn9aQ62205 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scn9aQ62205 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms