Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.22□□□□□ -0.45
VcanQ62059 Gm25201-201ENSMUST00000083093 170 ntBASIC12.22□□□□□ -0.45
VcanQ62059 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
VcanQ62059 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.22□□□□□ -0.45
VcanQ62059 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
VcanQ62059 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VcanQ62059 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC12.22□□□□□ -0.45
VcanQ62059 Gm15770-201ENSMUST00000117498 584 ntBASIC12.22□□□□□ -0.45
VcanQ62059 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.22□□□□□ -0.45
VcanQ62059 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
VcanQ62059 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.22□□□□□ -0.45
VcanQ62059 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VcanQ62059 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
VcanQ62059 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
VcanQ62059 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VcanQ62059 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
VcanQ62059 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VcanQ62059 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
VcanQ62059 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
VcanQ62059 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.21□□□□□ -0.45
VcanQ62059 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
VcanQ62059 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
VcanQ62059 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
VcanQ62059 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
VcanQ62059 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
VcanQ62059 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
VcanQ62059 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
VcanQ62059 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
VcanQ62059 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
VcanQ62059 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
VcanQ62059 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.21□□□□□ -0.45
VcanQ62059 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
VcanQ62059 Gm11979-201ENSMUST00000119629 743 ntBASIC12.21□□□□□ -0.45
VcanQ62059 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.21□□□□□ -0.45
VcanQ62059 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.21□□□□□ -0.45
VcanQ62059 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.21□□□□□ -0.45
VcanQ62059 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
VcanQ62059 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
VcanQ62059 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
VcanQ62059 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
VcanQ62059 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
VcanQ62059 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
VcanQ62059 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
VcanQ62059 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.21□□□□□ -0.45
VcanQ62059 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
VcanQ62059 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
VcanQ62059 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.21□□□□□ -0.46
VcanQ62059 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
VcanQ62059 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
VcanQ62059 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
VcanQ62059 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
VcanQ62059 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
VcanQ62059 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
VcanQ62059 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
VcanQ62059 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
VcanQ62059 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.21□□□□□ -0.46
VcanQ62059 Gm15711-201ENSMUST00000118889 535 ntBASIC12.21□□□□□ -0.46
VcanQ62059 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.21□□□□□ -0.46
VcanQ62059 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
VcanQ62059 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
VcanQ62059 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.21□□□□□ -0.46
VcanQ62059 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.21□□□□□ -0.46
VcanQ62059 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.21□□□□□ -0.46
VcanQ62059 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
VcanQ62059 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
VcanQ62059 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
VcanQ62059 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
VcanQ62059 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VcanQ62059 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VcanQ62059 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VcanQ62059 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
VcanQ62059 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.2□□□□□ -0.46
VcanQ62059 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
VcanQ62059 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.2□□□□□ -0.46
VcanQ62059 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
VcanQ62059 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC12.2□□□□□ -0.46
VcanQ62059 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.2□□□□□ -0.46
VcanQ62059 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.2□□□□□ -0.46
VcanQ62059 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
VcanQ62059 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VcanQ62059 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.2□□□□□ -0.46
VcanQ62059 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
VcanQ62059 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VcanQ62059 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
VcanQ62059 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VcanQ62059 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.2□□□□□ -0.46
VcanQ62059 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.2□□□□□ -0.46
VcanQ62059 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VcanQ62059 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
VcanQ62059 Gm15036-201ENSMUST00000118880 400 ntBASIC12.2□□□□□ -0.46
VcanQ62059 Gm11941-201ENSMUST00000119904 610 ntBASIC12.2□□□□□ -0.46
VcanQ62059 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.2□□□□□ -0.46
VcanQ62059 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC12.2□□□□□ -0.46
VcanQ62059 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.2□□□□□ -0.46
VcanQ62059 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.2□□□□□ -0.46
VcanQ62059 Gm19091-201ENSMUST00000208120 978 ntBASIC12.2□□□□□ -0.46
VcanQ62059 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VcanQ62059 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VcanQ62059 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
VcanQ62059 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms