Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Col11a1Q61245 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col11a1Q61245 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
Col11a1Q61245 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col11a1Q61245 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col11a1Q61245 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col11a1Q61245 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col11a1Q61245 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col11a1Q61245 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col11a1Q61245 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Col11a1Q61245 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col11a1Q61245 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Col11a1Q61245 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col11a1Q61245 Gm15515-201ENSMUST00000117827 822 ntBASIC14.62□□□□□ -0.07
Col11a1Q61245 Gm11450-201ENSMUST00000121144 333 ntBASIC14.62□□□□□ -0.07
Col11a1Q61245 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC14.62□□□□□ -0.07
Col11a1Q61245 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col11a1Q61245 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC14.62□□□□□ -0.07
Col11a1Q61245 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC14.62□□□□□ -0.07
Col11a1Q61245 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col11a1Q61245 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col11a1Q61245 Gm5525-201ENSMUST00000190438 1312 ntBASIC14.62□□□□□ -0.07
Col11a1Q61245 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
Col11a1Q61245 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col11a1Q61245 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col11a1Q61245 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Col11a1Q61245 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col11a1Q61245 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col11a1Q61245 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col11a1Q61245 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col11a1Q61245 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col11a1Q61245 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Col11a1Q61245 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Col11a1Q61245 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Col11a1Q61245 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.62□□□□□ -0.07
Col11a1Q61245 Gm15432-201ENSMUST00000121106 195 ntBASIC14.62□□□□□ -0.07
Col11a1Q61245 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Col11a1Q61245 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col11a1Q61245 Gm29615-201ENSMUST00000185371 697 ntBASIC14.62□□□□□ -0.07
Col11a1Q61245 Gm28224-201ENSMUST00000186078 697 ntBASIC14.62□□□□□ -0.07
Col11a1Q61245 Gm29001-201ENSMUST00000186177 697 ntBASIC14.62□□□□□ -0.07
Col11a1Q61245 Gm28292-201ENSMUST00000186593 697 ntBASIC14.62□□□□□ -0.07
Col11a1Q61245 Gm28101-201ENSMUST00000187608 697 ntBASIC14.62□□□□□ -0.07
Col11a1Q61245 Gm29076-201ENSMUST00000187689 697 ntBASIC14.62□□□□□ -0.07
Col11a1Q61245 Gm28302-201ENSMUST00000187931 697 ntBASIC14.62□□□□□ -0.07
Col11a1Q61245 Gm28646-201ENSMUST00000188220 697 ntBASIC14.62□□□□□ -0.07
Col11a1Q61245 Gm28205-201ENSMUST00000189177 697 ntBASIC14.62□□□□□ -0.07
Col11a1Q61245 Gm29032-201ENSMUST00000189797 697 ntBASIC14.62□□□□□ -0.07
Col11a1Q61245 Gm28695-201ENSMUST00000190300 697 ntBASIC14.62□□□□□ -0.07
Col11a1Q61245 Gm37448-201ENSMUST00000192795 697 ntBASIC14.62□□□□□ -0.07
Col11a1Q61245 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col11a1Q61245 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.62□□□□□ -0.07
Col11a1Q61245 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Col11a1Q61245 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col11a1Q61245 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col11a1Q61245 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.61□□□□□ -0.07
Col11a1Q61245 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.61□□□□□ -0.07
Col11a1Q61245 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.61□□□□□ -0.07
Col11a1Q61245 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col11a1Q61245 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col11a1Q61245 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col11a1Q61245 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col11a1Q61245 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Col11a1Q61245 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col11a1Q61245 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.61□□□□□ -0.07
Col11a1Q61245 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col11a1Q61245 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col11a1Q61245 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Col11a1Q61245 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col11a1Q61245 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col11a1Q61245 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col11a1Q61245 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC14.61□□□□□ -0.07
Col11a1Q61245 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.61□□□□□ -0.07
Col11a1Q61245 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col11a1Q61245 Gm19187-201ENSMUST00000206781 892 ntBASIC14.61□□□□□ -0.07
Col11a1Q61245 Gm44999-201ENSMUST00000207456 1493 ntBASIC14.61□□□□□ -0.07
Col11a1Q61245 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.61□□□□□ -0.07
Col11a1Q61245 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col11a1Q61245 Gm6781-201ENSMUST00000038304 1242 ntBASIC14.61□□□□□ -0.07
Col11a1Q61245 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col11a1Q61245 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col11a1Q61245 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col11a1Q61245 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Col11a1Q61245 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col11a1Q61245 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col11a1Q61245 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col11a1Q61245 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col11a1Q61245 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col11a1Q61245 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.6□□□□□ -0.07
Col11a1Q61245 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col11a1Q61245 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.6□□□□□ -0.07
Col11a1Q61245 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col11a1Q61245 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Col11a1Q61245 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Col11a1Q61245 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col11a1Q61245 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.6□□□□□ -0.07
Col11a1Q61245 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.6□□□□□ -0.07
Col11a1Q61245 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.6□□□□□ -0.07
Col11a1Q61245 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col11a1Q61245 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms