Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.2□□□□□ -0.14
Shroom1Q5SX79 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Gm4271-201ENSMUST00000174444 973 ntBASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.19□□□□□ -0.14
Shroom1Q5SX79 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shroom1Q5SX79 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Shroom1Q5SX79 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Shroom1Q5SX79 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Shroom1Q5SX79 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.18□□□□□ -0.14
Shroom1Q5SX79 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shroom1Q5SX79 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.18□□□□□ -0.14
Shroom1Q5SX79 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shroom1Q5SX79 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Shroom1Q5SX79 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Shroom1Q5SX79 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shroom1Q5SX79 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shroom1Q5SX79 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Shroom1Q5SX79 Gm12203-201ENSMUST00000118235 598 ntBASIC14.18□□□□□ -0.14
Shroom1Q5SX79 Gm12209-201ENSMUST00000120089 596 ntBASIC14.18□□□□□ -0.14
Shroom1Q5SX79 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.18□□□□□ -0.14
Shroom1Q5SX79 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Shroom1Q5SX79 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.18□□□□□ -0.14
Shroom1Q5SX79 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Shroom1Q5SX79 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Shroom1Q5SX79 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.18□□□□□ -0.14
Shroom1Q5SX79 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shroom1Q5SX79 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.18□□□□□ -0.14
Shroom1Q5SX79 Gm29608-201ENSMUST00000190444 463 ntBASIC14.18□□□□□ -0.14
Shroom1Q5SX79 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Shroom1Q5SX79 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shroom1Q5SX79 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shroom1Q5SX79 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Shroom1Q5SX79 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shroom1Q5SX79 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.18□□□□□ -0.14
Shroom1Q5SX79 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Shroom1Q5SX79 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shroom1Q5SX79 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shroom1Q5SX79 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.18□□□□□ -0.14
Shroom1Q5SX79 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shroom1Q5SX79 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms